Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq9860 641 6e-179 seq74052 279 7e-70 seq14616 111 2e-19 >seq9860 Length=13996 Score = 641 bits (710), Expect = 6e-179 Identities = 1425/2118 (67%), Gaps = 34/2118 (2%) Strand=Plus/Plus Query 75524 ATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATA 75583 |||||||| || | ||| || ||||||| ||| ||||||| | ||| ||||||| Sbjct 9144 ATGAAAGCGCCACGATCGGCGGCCATTTGTATGGTGGTCTTAACGGAAATCTCCCAAACT 9203 Query 75584 GTTTTGAAAACTTGTTTGATATCATCTGGAAGAT-TTGTATT--TTGAATGGATCCGCCA 75640 || ||| | | | |||| | |||| | || ||| ||| ||||| |||| | Sbjct 9204 GTCTTGTATAGATCACGTATATGTTTGGGAATTTCTTCTATGGCTTGTATGGAGCCGCGA 9263 Query 75641 TCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTA 75700 | || |||||| |||| || || ||||||| ||| || | ||||||||| || || Sbjct 9264 TTGGAAATAATTTTATTTTTCATTTCATCATCCCATAAATCAAGTTCGGTTAAATCTTTA 9323 Query 75701 AGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTA 75760 || | |||| |||| |||| | |||||||| ||||| || | || |||||||||||| Sbjct 9324 AGCAAATGATGATTGACAACATTGAATTCTCCCGACAAAACACGTCTAGTGTAAATATTG 9383 Query 75761 CTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGC 75820 ||| || ||||| | ||||||||||| || | |||||| || || ||||| || ||| Sbjct 9384 GAGGTGTACGGTTCAAAGGATTCATTGTTGCCTAGAATTTGTGCGGTCGAAGCTGTGGGC 9443 Query 75821 ATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATAT 75880 || || || | | ||| ||| | | ||||||| ||||||| || || | | | Sbjct 9444 ATGGGGGCTAATAGCAAAGAATTGCGTACACCATGTTGCTTGATTTTCTCCTTCAACTCT 9503 Query 75881 TTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTG 75940 ||| | ||| | |||| ||| || ||| | |||||||||||| || || || Sbjct 9504 GACCAGTTCCACAAGTCTGTGGGTGTTTTATTCCACATATCGTATTGTAGTATACCCTTA 9563 Query 75941 CTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTC 76000 || | | || ||| ||||| || || || || ||||| || | ||| ||||| Sbjct 9564 CTTACTGGACAGCCGGGATAAGTTTCATATGTGCCATCTTTTTCGGCCAATTCACAACTA 9623 Query 76001 GCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCA 76060 || || || || || |||||||| ||||||||||||| | ||| | ||| | Sbjct 9624 GCTTCCAATGCGCCATAATAAATAGTTTCGAAAATCTGTTGATTTAACAAAAACGCCTTT 9683 Query 76061 AGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATA 76120 ||| ||| | || ||| | | | ||| || | ||| || | |||||||| || || Sbjct 9684 TCACTCTCATAGGGGTAACGCATTAAAATCAAAGTATCGGCAAAACCCTGAACACCTATG 9743 Query 76121 CCAATAGGTCTATGTCTCTTATTGGAAATTTC--AGCTTCTGGAATAGGGTAATAATTAA 76178 |||||||| | ||| | | |||||| ||||| ||| || || | || ||||| |||| Sbjct 9744 CCAATAGGACGATGACGCATATTGG--ATTTCCTAGCCTCAGGCAAGGGATAATAGTTAA 9801 Query 76179 TATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAA 76238 | || || ||||| |||||||| || || |||||| || | || | ||| || Sbjct 9802 TGTCGATGATTTTGTTGAGATTCTTGGTAATGACTTTAGTGACATTTTTCAATTTTTTAA 9861 Query 76239 AATCAAA---TTTTCCATCTATCACAAACATATTAAGAGCTATAGATGCTAGATTACAAA 76295 ||||||| ||| | | | |||||||||||||| ||||| || || | |||||||| Sbjct 9862 AATCAAAGGTCTTTTCTGGTGTGACAAACATATTAAGGGCTATGGAGGCCAAATTACAAA 9921 Query 76296 CGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGA 76355 |||||| ||||| || | ||||| || ||||| ||||| | || || ||||| | Sbjct 9922 CGGCTATCTCATCAGGGGCAGAATATTCTACAATCTCTGTGCACAAGTTGCTGCACTTAA 9981 Query 76356 TAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACG 76415 | || |||| |||||| ||||| || || ||| || | || ||||| | | | | | Sbjct 9982 TGGTGCCAATATTTTGCTGGTTACTTTTGCGGTTGCAGGCATCTTTATACAACATATAGG 10041 Query 76416 GAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT-AGCTTTTATT 76474 |||| || ||||| | || | ||| || |||| ||| | || || ||| || | Sbjct 10042 GAGTACCGGTTTCTACTTGGGCTTCAATTATAGCAAACCA-AAGAGCCTGAGCCTTGACA 10100 Query 76475 AT-AGATTTGTATCGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCC 76533 | |||| | | | | ||| ||||||| | ||||| || ||| ||||| || || Sbjct 10101 GTGCGATTGGCCTTACCT-TCTTTTTCATACTTGGTATACAATTCTTCGAATTCCTCACC 10159 Query 76534 CCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTC 76593 ||||||||| | || ||| ||||||| | |||||||| | ||||| ||||||| ||| Sbjct 10160 CCAAACATCCTGCAGACCGGGACATTTGTGAGGACACATTAGGGACCAGTCACCATTTTC 10219 Query 76594 CTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCT 76653 | || ||||||||||| | || |||||||| | |||| || ||||||| || ||| Sbjct 10220 TTCCACACGTTTCATAAACAAGTCGGGTATCCACAAAGCATAGAAAAGATCTCTGGCTCT 10279 Query 76654 ACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCA 76713 | ||||| || || || || || || | ||| | || || | |||||| |||||||| Sbjct 10280 GTGCTCTTCCTTGCCGGTGTTTTTCTTTAAATCCAAAAATTCAAAAATATCTGAATGCCA 10339 Query 76714 TGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCT 76773 || || | ||| || || | |||| || ||||| ||| |||||||| | ||| | Sbjct 10340 AGGCTCCAAATAAATAGCAAAGGCACCAGGGCGTTTGCCACCACCCTGATCAACATAACG 10399 Query 76774 GGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCC 76833 ||| || ||| | || || | |||||| | | || || || || || || || || Sbjct 10400 GGCCACATTGTTAAACACCCTAAGCATTGGTACCAGACCATTTGAGGTGCCGTTAGTGCC 10459 Query 76834 AGAAATATAACTTCCACATGCACGAAT--ATTACTAATAGATAGGCCTATTCCTCCTGCC 76891 ||| || | || || | ||| | | | | | || ||| || || || || Sbjct 10460 GTCAATGGAAGTGCCCTTAGCTCTAATGCAGTGC--ACATTTATGCCAATACCACCCGCT 10517 Query 76892 ATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCC 76951 ||| || || | ||||| ||| || || | | || ||||| ||| ||| || Sbjct 10518 GATTTGGAAATCATGGCACATTGTTCCACTGACTTGAAAATACCCTCAATAGAATCGGCC 10577 Query 76952 ATCAT-GTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAA 77010 | ||| || || ||| || || |||| || | | || | || |||||| Sbjct 10578 ACCATGGTCAACAAG-AAGCATGACGACAACTGCGGTCTATTGGTAGCGGCCGCAAACAA 10636 Query 77011 TGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGC 77070 |||||| || |||||||| || | ||||| | | ||| || ||||||||| | | Sbjct 10637 TGTAGGTGAAGCATGAGTAAAATAACGCTCAGACAACAAATTATAAGTTTCAATAGCCGA 10696 Query 77071 TTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTC 77130 || ||||| | ||| || |||| ||| || | ||| ||||||||||| |||| || Sbjct 10697 ATCAATATCATCTCCATGTATACCTATAGCTACTCTCATTAACATATGCTGTGGTCTCTC 10756 Query 77131 TACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATA 77190 ||| ||||| ||| ||||||| ||| || ||| | |||| || || || || || || Sbjct 10757 AACAATCTTACCATTCATTTTCAGCAAATAAGATCTCTCCAGTGTCTTGAAGCCGAAGTA 10816 Query 77191 GTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTT--AGTTTGTCCTTATATTTG 77248 |||||| |||||| | || |||||||| ||||||| | || | | | | | || Sbjct 10817 GTTGTAGCCAAAGTCACGATCATAAATAATTGACGAATTTAAACGTTCTGCATTTTTCTG 10876 Query 77249 GTAACAATATCCATGACAGTGGTA----GAAATAATTGGAGATCGTATTCCATTTTTAGG 77304 || || ||| ||||||| ||||| | || ||| || | || | | Sbjct 10877 ----CACTA--CATTGTAGTGGTATTCGGAAATCAAAGGCGATGGTCTCCCCGTCTCTTT 10930 Query 77305 ATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTG 77364 ||||||| | | | | | || || || || |||| |||||| ||||| ||||| Sbjct 10931 ATTAACAAAATGATACAGATCACTTATAACCTCTGAGAATACTTTTTTCGTTTCTTTGTG 10990 Query 77365 TAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCA 77424 | ||| ||||| || || | ||| || | || ||||| || ||| | ||||| | Sbjct 10991 CAAATTGGATACTGCAATACGAGCTGCCAATATGGCATAATCGCCATGATTAGTAGTTAA 11050 Query 77425 GGTGGCTGCTATTTCTGCCGCTAAAGTATCTAATTCTATAGTAGTAACTCCGTTATATAG 77484 || || || | |||||||| ||| |||||| |||| |||||||| || || || Sbjct 11051 TGTAGCAGCAGTCTCTGCCGCCAAATTATCTAGTTCTTGTGTAGTAACACCACAGTAAAG 11110 Query 77485 CCCTTGAATAACTTTCATGGCTATTTTGATAGGATCTACAAACTCGGTGTTCAAACCATA 77544 || | ||| || |||| | || | ||||| || || || | ||||| ||||| Sbjct 11111 GCCATTAATTACCTTCAGTGTAATGGCCACTGGATCAACGAAATCCATATTCAAGCCATA 11170 Query 77545 ACATAATTTTCTAATACGAGATGTGATTTTATCAAACATG-ACATTCTCCTTACATCCAT 77603 |||| ||| ||| || ||||| |||||||| || ||| || | ||||| | ||||| Sbjct 11171 GCATAGCTTTTGAATTCGTGATGTTATTTTATCGAA-ATGAACCTCTTCCTTGCGTCCAT 11229 Query 77604 TTCGTTTAATGACGAACA 77621 |||||||| || |||| Sbjct 11230 CTCGTTTAAGAACAAACA 11247 Score = 86.0 bits (94), Expect = 9e-12 Identities = 125/174 (72%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 75368 TTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCA 75427 ||||| | || || ||||| | | || |||||| ||||| | | ||| ||||| || Sbjct 8923 TTATCTACGGTAAATTGAATAGCATTGGCTGCTGGCTTTGTTCTCAAATAATACATGCCG 8982 Query 75428 GTTTTTAGACCCAGACT-CCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGG 75486 || |||| | || || | ||| | |||||||| ||| || | |||| ||| | || Sbjct 8983 GTCTTTA-AGCCTGATTTCCAGGCATAGAAATGTATGGAGGTCAATTTGCCGTAATTTGG 9041 Query 75487 ATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATC 75540 ||||| | ||| ||||| | ||| ||||||||||| |||||||| || | ||| Sbjct 9042 CTCGGCCACATGTATATTGAACGATTGACTTTGATCTATGAAAGCGCCACGATC 9095 >seq74052 Length=11856 Score = 279 bits (308), Expect = 7e-70 Identities = 492/707 (70%), Gaps = 19/707 (3%) Strand=Plus/Plus Query 46464 ATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTTGAC 46523 ||| || || |||||||| || | ||||| || ||||||||| ||||| | ||||| Sbjct 5452 ATCGGCCACAAATTCTATGTATTCTGACATCAATTTACAATTCATGCCTATCAAATTGAC 5511 Query 46524 CGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCG--ATATTATCGAT 46581 || | ||| || ||||| || ||||||||||| | || || || | ||| | || || Sbjct 5512 GGGCAAAGCATCTGTAAGGAATTCTTGTTCAATTTTCACCGCTTCGGTGATAATTTCAAT 5571 Query 46582 GTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAATCA 46641 | || | || ||| || | || | |||||||||||||||||| ||||||||| Sbjct 5572 AATTCTCT--CCCGACTGGGACGTTGTACCAAATGTTTAAACATTAATACCGCAAAATCA 5629 Query 46642 CAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGT 46701 ||||| | || ||||| | ||| ||||| || || ||||| || |||||||| || Sbjct 5630 CAATGTAAACCCTCATCACGTGAAATCAATTCATTGGAGAATGTAAGACCAGGCATAAGA 5689 Query 46702 CCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACA 46761 ||||| || || ||||| || || | || ||| ||| ||||| || || || ||| Sbjct 5690 CCACGTTTCTTTAGCCAGAAGATGGAGGCAAAACTGCCACTGAAGAAAATACCCTCCACA 5749 Query 46762 GCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATT--ATGAA-TCCA--CCTTT 46816 || || || || | || | || || || | || || | ||| |||| || | Sbjct 5750 GCAGCAAAAGCAATAATACGTTCACCAAAATTAGCCGATTTCGAGGAAATCCAAGCCAT- 5808 Query 46817 GAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGt 46876 ||||||||||||||| ||| ||| ||||| ||||| || |||||||||||| | | Sbjct 5809 -AGCCCAATCAGCCTTACGCTTAACAGCCGGCATAGTTTCAATGGCATTAAAGAGATAAT 5867 Query 46877 ttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAA 46936 | || | ||| |||| ||| |||| |||| || |||||||||||| || || | Sbjct 5868 CACGCTGCTCGCGATCCTTAATATAACTATCAATTAGAATACTATACATTTCAGAGTGTA 5927 Query 46937 TGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTG 46996 ||||| || || || || || || || ||||| | ||| || |||| ||||| ||| Sbjct 5928 CATTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGTGCCTCTGTAACTTGTACTTCTT 5987 Query 46997 TACAAAATCGTTCAGACAA-ATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCC 47055 | || |||||| |||| ||| ||||| || || ||||| ||||||||| || || Sbjct 5988 GGGAGAAGCGTTCA-ACAAGATTTTCATTGACAATGCCATCGGAAGCAGCAAAGAAAGCT 6046 Query 47056 AATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTC---ATTGATA 47112 | |||||| ||| |||| ||||| | || ||| | | |||||| |||| Sbjct 6047 AGAACATGTGAAATGAAATGACGTTCATTGTCGGTGAGTCTTTCCCAGTCGGAATTG--- 6103 Query 47113 TCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGC 47159 ||||| || | ||| |||||||| | ||||| || || || || || Sbjct 6104 TCTTTGGAAAGATCCACTTCTTCTACAGTCCAAAAAGAAGCTTCGGC 6150 >seq14616 Length=5376 Score = 111 bits (122), Expect = 2e-19 Identities = 128/171 (75%), Gaps = 6/171 (4%) Strand=Plus/Plus Query 41761 CCAATACACTTCAAAAATTTGAGTGAGATCAACTGCCAAATTCGTATTATTGAAGATGGC 41820 |||||| |||||||||||| | | ||| ||||| | | | ||| | |||| Sbjct 1280 CCAATATTCTTCAAAAATTTTGCTTAAATCTCGCGCCAATGTGGGACAATTCA---TGGC 1336 Query 41821 ---AATTCCCAATTCCTTAACCTGTGACAGAGATCTCCAATCCATATTAGCACTTCCTAA 41877 ||| |||||||| |||||||||| | ||||||||| |||||||| ||||| || || Sbjct 1337 TAAAATACCCAATTCTTTAACCTGTGTTAAAGATCTCCAGTCCATATTGGCACTGCCCAA 1396 Query 41878 ATAAATATGCATATTATCAGATATCCAAAATTTTGTGTGAAGAACTCCACC 41928 |||||| || | ||||| || |||||||||||||| || | ||| ||||| Sbjct 1397 ATAAATGTGTTTGTTATCGGAAATCCAAAATTTTGTATGTAAAACACCACC 1447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712113857064000