Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq43370 109 1e-18 seq10127 89.7 1e-12 seq82145 86.0 1e-11 >seq43370 Length=3724 Score = 109 bits (120), Expect = 1e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || | ||| | ||| || || |||||||||||||| |||| || || | ||||| Sbjct 2574 GAGTACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGACCATC 2515 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| | ||| || |||||||| | | || || || | | ||| ||||| || || Sbjct 2514 TTCCAATTGTTTACCAGCGAAGATCAAACGTTGTTGATCTGGGGGGATACCTTCTTTGTC 2455 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||| ||||| |||||| | || | | |||| ||| ||| ||||| | ||||| || Sbjct 2454 TTGGATTTTGGCCTTGACATTTTCAATGGTGTCGGAAGGCTCGACTTCCAAGGTAATGGT 2395 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || || | ||| || ||||||| |||||| Sbjct 2394 TTTACCAGTTAAAGTTTTGACGAAGATCTGCAT 2362 >seq10127 Length=8452 Score = 89.7 bits (98), Expect = 1e-12 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| || || ||||| |||||||||||||| || | ||||| | |||||| Sbjct 6921 AGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTGCGACCATCT 6980 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | ||| ||||| ||||| | | ||||| || | | || |||||||| || Sbjct 6981 TCCAATTGTTTGCCGGCAAAGATCAAACGTTGCTGATCTGGAGGAATACCTTCCTTATCC 7040 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||||| | || | |||| ||| ||| ||||| | || || ||| Sbjct 7041 TGGATCTTAGCCTTGACGTTTTCAATAGTGTCCGAAGGCTCGACTTCCAAGGTGATGGTT 7100 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || | ||||| ||||||| ||||| Sbjct 7101 TTACCGGTCAAGGTCTTTACGAAGATTTGCAT 7132 >seq82145 Length=1636 Score = 86.0 bits (94), Expect = 1e-11 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 ||||| |||||||| || || ||||| | || || | ||| ||||| | ||| || Sbjct 1367 GTAGATTCTTTTTGTATATTATAATCAGACAATGTGCGCCCGTCTTCCAATTGTTTGCCA 1308 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 || || || | | || || || | | |||||||||||| ||||||||||| ||| Sbjct 1307 GCAAAAATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGAATTTTAGCTTTA 1248 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 ||| | || | | || ||| ||| || || | ||| || |||||||| || | ||| Sbjct 1247 ACATTTTCAATAGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTTGCCAGTCAATGTC 1188 Query 152088 TTCACGAAGACCTGCAT 152104 || || |||| ||||| Sbjct 1187 TTAACAAAGATTTGCAT 1171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1152459624982325