Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq76374 123 3e-23 >seq76374 Length=5101 Score = 123 bits (136), Expect = 3e-23 Identities = 276/414 (67%), Gaps = 24/414 (6%) Strand=Plus/Plus Query 155730 CGACTCAACGCCGTCGATTGAGCGGCGCGTACCAACCCTTCCAATTCAGCGCCGCTGTAA 155789 ||| ||| || || || ||||| || |||||||| ||||||||||| || || || | Sbjct 2980 CGATTCATGGCTGTAGACTGAGCAGCACGTACCAAACCTTCCAATTCGGCACCACTAAAG 3039 Query 155790 TTTTTAGTTTCAACGGCTATTTTATTTAAGTCTACGTCGGAAGCTAATATGTTGTGAGAT 155849 |||||||| | | || || | || | || || || | || | | | ||| || Sbjct 3040 TTTTTAGTAAGAGCAGCAATCTCCTTGGAATCAACATCTGGGGCAATTTTATTGA---AT 3096 Query 155850 TT---CAT---TTTAGCAACGTGCACCTTTAAAATTTGAAGACGCCCCTTTTCATCGGGT 155903 | ||| ||| | ||| | ||||||||||| | ||| |||| ||||| |||| Sbjct 3097 TCACGCATGCGTTTGGT---GTGAATATTTAAAATTTGCACACGACCCTGTTCATTGGGT 3153 Query 155904 AATCCAATTTCTATCTTCAATTCCAACCGCCCAGGTCTTAATAATGCTTCGTCAATTAAG 155963 || | |||||| || | | |||||| || || || | ||||| || || ||||| | Sbjct 3154 AAACTAATTTCCATTTGTACTTCCAAACGACCGGGACGCAATAAGGCGTCATCAATCATA 3213 Query 155964 TCGGGTCTGTTGGTCATACCTATGATTAAAATGTTGTTTAAAGATTCTACACCGTCTATT 156023 || | | || |||||||| || | ||||||||| ||||| |||||| || || ||| Sbjct 3214 TCACGACGATTAGTCATACCAATAACTAAAATGTTATTTAATTGTTCTACGCCATCGATT 3273 Query 156024 TTAGACAATAATTGATTGACTACGGCGTCGTG------------CGTGGCGTTATCACCG 156071 || | || |||||||| || || | || || ||| | ||| Sbjct 3274 TTGGCTAACAATTGATTTACCACAGTATCATGGACACCACTATTGCCGGCCACAGAACCA 3333 Query 156072 CGTTTTTTACACAGAGCATCTATTTCATCGAAGACGATAACGTGTAATCCGCTG 156125 |||| ||| || | ||||| |||||||| |||| |||| ||| || |||||| Sbjct 3334 CGTTGTTTGCAAATGGCATCGATTTCATCAAAGATTATAATGTGCAAACCGCTG 3387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666307438137000