Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq79 152 5e-32 >seq79 Length=216850 Score = 152 bits (168), Expect = 5e-32 Identities = 402/609 (66%), Gaps = 10/609 (2%) Strand=Plus/Plus Query 16946 AGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGT 17005 || || || ||||| ||||| || || || || || | ||||| || | || || Sbjct 76179 AGGTGCTTGAACATTAGACACGCAAAGTCACAGTGGAGGCCCTCATCGCGTGAAATGAGC 76238 Query 17006 TCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCG 17065 || || || || | |||||||| | || ||| ||| | ||| || || | |||| Sbjct 76239 TCATTGCTGAACGTGAGTCCGGGCATGATGCCGCGTGACTTGAGCCAGAAGATTGAGGCG 76298 Query 17066 AA-CGACC-CAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGT 17123 || | ||| | ||| ||| || ||||| || | ||||| || || | | |||| || Sbjct 76299 AAGCTACCGCTGAA--GAAAATCCCCTCAACTGCCGCAAAGGCAATGACCCTTTCGCCGA 76356 Query 17124 ACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAAT 17183 | | || || | | | |||||| | | |||| ||||| || | ||| | || Sbjct 76357 AATTTGCTTCCTGGCTGGCAATCCACTGGAGTGCCCAATCGGCCTTCTTCTTCACACACG 76416 Query 17184 CCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTAT 17243 || ||| || ||||| || || | || || ||||| | || ||| ||||||| Sbjct 76417 GCAGCGTCTCGATGGCATTGAAGAGGAAGTCCTTCTCCTGCGGATCCCGTATGTACGTAT 76476 Query 17244 CGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAA 17303 | ||||| | |||||||||||| |||| ||||||||||| ||||| || || || | Sbjct 76477 CAATGAGCAAACTGTACATTTCGCTATGTACATTCTCCATGGCAATCTGGAAGCCATAGA 76536 Query 17304 AGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCA 17363 || |||| || || | ||||| || ||| ||| || ||| | ||||| || || | Sbjct 76537 AGAATCGTGCCTCTGTGATTTGCACCTCCTGACTGAAGCGCTCCACGAGATTCTCATTTA 76596 Query 17364 CGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCG---T 17420 | || || ||| || || || || |||| | || ||||||| | ||||| | Sbjct 76597 CAATCCCATCGGATGCCGCAAAGAATGCCAGGACGTGGCTAATGAATTTCCTTTCGCAAT 76656 Query 17421 CCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCC 17480 || | | | | ||||| | | ||| ||||| || ||||| || |||| Sbjct 76657 CC---TTCAAAGCATTCCAGTGATCCATATCCCGGGATAGGTCTACTTCCTCAACTGTCC 76713 Query 17481 AAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAATA 17540 |||| ||| | |||||||| ||||| | ||| | ||| | |||||| |||||||| | Sbjct 76714 AAAATGAGGCCTCGGCCTTTTTGTACATCTCCCACACATCGTGGTATTGAATGGGGAAGA 76773 Query 17541 CAACATATC 17549 ||||| ||| Sbjct 76774 CAACAAATC 76782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517470995801760