Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq1371 96.9 3e-15 >seq1371 Length=16595 Score = 96.9 bits (106), Expect = 3e-15 Identities = 183/267 (69%), Gaps = 2/267 (1%) Strand=Plus/Minus Query 18927 CGACGAATGATTATATCGTCTTGGAATCCAAAGGATATCCCCTTAATGGTACTACCTCCA 18986 || ||||| ||||| | |||||||| |||| ||||| |||||| || || || Sbjct 8907 CGTCGAATCATTATGAGTGCATGGAATCCTGTGGATCTCCCCATAATGGCGCTCCCACCC 8848 Query 18987 TGTCACACGTTATGT-CAGTTTTACGTTGCAAACGGTGAATTATCCTGCCAAGTATACCA 19045 |||||| | ||| || || ||||| || || || || | || |||||| | || || Sbjct 8847 TGTCACTGCCT-TGTACAATTCTACGTGGCCAATGGAGAGCTCTCGTGCCAAATGTATCA 8789 Query 19046 GAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTAC 19105 | || | || ||||| || |||||||| ||||||||||| | ||||| || || || Sbjct 8788 ACGTTCAGCCGACATGGGACTGGGGGTACCATTCAACATTGCCAGCTATGCTCTCCTCAC 8729 Query 19106 CTACATAGTAGCGCATGTTACAGGACTTAAAACCGGAGATTTAATTCATACAATGGGGGA 19165 || | || || | |||| || || | ||||| || | || || | || || Sbjct 8728 ACGAATGATTGCCCAAATCACAGATCTCAAGCCAGGAGACTTCGTGCACACCCTCGGTGA 8669 Query 19166 TGCACATATTTACTTGAATCATATAGA 19192 ||| ||| | ||||||||||| |||| Sbjct 8668 TGCTCATGTCTACTTGAATCACGTAGA 8642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399447851210940