Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1371 140 4e-28 >seq1371 Length=16595 Score = 140 bits (154), Expect = 4e-28 Identities = 392/593 (66%), Gaps = 19/593 (3%) Strand=Plus/Plus Query 145684 AGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCG 145743 ||||| || ||||| || | |||||| || || || || ||| ||| | |||||| || Sbjct 8636 AGGGGTTCTACGTGATTCAAGTAGACATGAGCATCACCGAGGGTGTGCACGAAGTCTCCT 8695 Query 145744 GGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTG 145803 |||| ||| | |||| ||||| | ||| || || || | |||||||| |||||| Sbjct 8696 GGCTTGAGATCTGTGATTTGGGCAATCATTCGTGTGAGGAGAGCATAGCTGGCAATGTTG 8755 Query 145804 AAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCG 145863 || || |||||||| |||||||| | || || || |||| ||||| |||||||| || Sbjct 8756 AATGGTACCCCCAGTCCCATGTCGGCTGAACGTTGATACATTTGGCACGAGAGCTCTCCA 8815 Query 145864 CCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCC 145923 ||||||||||| || ||| ||| ||||| || || ||||| ||| || ||| Sbjct 8816 TTGGCCACGTAGAATTGTACAAGGCAGTGACAGGGTGGGAGCGCCATTATGGGGAGATCC 8875 Query 145924 GCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTC-TTGATCTCCCC 145982 | || ||||| || | | | || | | | || ||| | ||| ||| | Sbjct 8876 ACAGGATTCCATGCACTCATAATGATTCGAC-GATCAGTGGGCTTCTCGCGGATAAGCTT 8934 Query 145983 TATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCAC-GT 146041 ||||| ||| || || ||||| ||||| || || | | || | | || || Sbjct 8935 TATCACCTCCTGAAGTTGATCCAC-CCCTGGCCGTCGT-ACGTATCACGACATGTACGGT 8992 Query 146042 ACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCC------CGG 146095 | | ||| || ||||| | ||| ||||| || || || |||||||| || | || Sbjct 8993 AGGGGGCACCAAAGTGACGCCATTGGAATCCATAAACAGGCCCCAGATCACCCTCTTCGC 9052 Query 146096 GCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGA 146155 | ||| || |||| | | || || | ||||||| | ||| | | ||| | Sbjct 9053 GATCCTTGAAGCCCATCTCATCC------AGATACTCCCGGGTACTGTTACCATTCCAAA 9106 Query 146156 TCTTGACGCCCCTC-GCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGC 146214 | ||| ||| || || | ||||| | ||||| || || | |||||||| | Sbjct 9107 TGGTGATACCCTTCTGCTG-TAGCTCTCGTGCATCCGTAGAGCCGCGTATGAACCAAATA 9165 Query 146215 AGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAA 146267 ||||| || || || | ||||||||| ||||| |||||||||| ||||| Sbjct 9166 AGCTCCTCAGCAACACCGCGCCAGAAGACTCTCTTCGTGGTCAGCAATGGGAA 9218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589991740429280