Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq79 383 2e-101 seq825 172 6e-38 seq1176 109 6e-19 >seq79 Length=216850 Score = 383 bits (424), Expect = 2e-101 Identities = 555/782 (71%), Gaps = 6/782 (1%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 ||||| || || || ||||| || || || || || | |||||||| ||||||| || Sbjct 76810 GAGCCCCTACTCCGGGAGAATCCACGACGATTTGTTGTCTTCCCCATTCAATACCACGAT 76751 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 ||||| |||||||||||||||||||| || || ||||| || ||||| || ||||| Sbjct 76750 GTGTGGGAGATGTACAAAAAGGCCGAGGCCTCATTTTGGACAGTTGAGGAAGTAGACCTA 76691 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCAC 116755 ||| ||| | | ||||| | ||||| || ||| | | ||||| | ||| Sbjct 76690 TCCCGGGATATGGATCACTGGAATGCTTTGAAGGATTGCGAAAGGAAATTCATTAGCCAC 76631 Query 116756 GTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTC 116815 || ||||| || || || || ||| || || || || |||||||| || ||||| ||| Sbjct 76630 GTCCTGGCATTCTTTGCGGCATCCGATGGGATTGTAAATGAGAATCTCGTGGAGCGCTTC 76571 Query 116816 GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAG 116875 |||||||||||| | | ||||| || | |||||| ||||| ||||| ||||||||| Sbjct 76570 AGTCAGGAGGTGCAAATCACAGAGGCACGATTCTTCTATGGCTTCCAGATTGCCATGGAG 76511 Query 116876 AACGTGCACTCGGAAATGTA---TTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAG 116932 || || || |||||||| || | ||||| || |||||| | || | || || Sbjct 76510 AATGTACATAGCGAAATGTACAGTTTG---CTCATTGATACGTACATACGGGATCCGCAG 76454 Query 116933 GAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAG 116992 |||||| | | || || |||||||||||| ||||||| || || |||||||||| Sbjct 76453 GAGAAGGACTTCCTCTTCAATGCCATCGAGACGCTGCCGTGTGTGAAGAAGAAGGCCGAT 76394 Query 116993 TGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTC 117052 ||||| || | ||||| ||| || || || |||||||| | | | ||||| Sbjct 76393 TGGGCACTCCAGTGGATTGCCAGCCAGGAAGCAAATTTCGGCGAAAGGGTCATTGCCTTT 76334 Query 117053 GCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAA 117112 ||||| || ||||| | ||||| || || |||||| | || || ||||||||| | Sbjct 76333 GCGGCAGTTGAGGGGATTTTCTTCAGCGGTAGCTTCGCCTCAATCTTCTGGCTCAAGTCA 76274 Query 117113 CGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTG 117172 |||||| |||||||||| || || |||||||| |||||||| || | || ||||| || Sbjct 76273 CGCGGCATCATGCCCGGACTCACGTTCAGCAATGAGCTCATTTCACGCGATGAGGGCCTC 76214 Query 117173 CATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGCGC 117232 || || |||||||| ||| | |||||||||| | |||||| || || |||| Sbjct 76213 CACTGTGACTTTGCGTGTCTAATGTTCAAGCACCTCGTGCAGAAGCCCTCAAAGGAGCGC 76154 Query 117233 GTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTG 117292 ||| || ||| | ||| || || |||| |||||| |||||||| || || || Sbjct 76153 ATCATCGAAATCATTCGCGAAGCTGTGACCATTGAGCAGGAATTCCTCACAGATGCCCTT 76094 Query 117293 CCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCC 117352 || || ||||||| | |||||| || |||||||| ||||| || ||||| || Sbjct 76093 CCTGTTGACATGCTGGGCATGAATTGCCAACTCATGTCGCAGTACATTGAATTCGTGGCA 76034 Query 117353 GA 117354 || Sbjct 76033 GA 76032 Score = 96.9 bits (106), Expect = 4e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 ||||| || || || ||||| || || || || || | |||||||| ||||||| || Sbjct 78819 GAGCCCCTACTCCGGGAGAATCCACGACGATTTGTTGTCTTCCCCATTCAATACCACGAT 78760 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 ||||| |||||||||||||||||||| || || ||||| || ||||| || ||||| Sbjct 78759 GTGTGGGAGATGTACAAAAAGGCCGAGGCCTCATTTTGGACAGTTGAGGAAGTAGACCTA 78700 Query 116696 TCC 116698 ||| Sbjct 78699 TCC 78697 >seq825 Length=38805 Score = 172 bits (190), Expect = 6e-38 Identities = 169/218 (78%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| || ||||| ||||| |||||||| || ||||||||| | || |||||| || Sbjct 12099 AAAATGCAGATTTTCGTGAAAACTCTCACGGGGAAGACCATCACCCTTGAGGTCGAACCC 12040 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | || | | ||| |||||| ||||||| || |||||||| ||||| |||| Sbjct 12039 TCGGATACAATTGAAAATGTCAAGGCGAAAATTCAGGATAAAGAGGGAATCCCTCCGGAT 11980 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| || ||||||| || || || ||||| || || | |||||||||| ||||||| Sbjct 11979 CAGCAGCGTCTCATCTTTGCCGGGAAGCAGCTAGAGGATGGGCGCACCCTCTCCGACTAC 11920 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||||||| |||| || ||| | ||| |||| Sbjct 11919 AACATCCAGAAGGAGTCCACCCTCCATTTGGTGCTGCG 11882 >seq1176 Length=25388 Score = 109 bits (120), Expect = 6e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| ||||| || || || |||||| |||| || || | | Sbjct 17492 ATGCAGATCTTTGTGAAAACACTCACAGGGAAGACGATCACCCTCGAGGTTGAGCCGTCA 17433 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | | || | ||||||| |||||||| ||||| || | || ||| Sbjct 17432 GATACCATCGAGAATGTAAAAGCTAAAATTCAGGACAAAGAAGGCATTCCGCCAGATCAG 17373 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| ||| || || |||||||| || | ||| || | |||||||||| Sbjct 17372 CAGCGTCTCATCTTCGCCGGGAAGCAGCTGGAAGATGGGCGTACATTGTCCGACTACAAC 17313 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||||| | || || || || ||| Sbjct 17312 ATCCAGAAGGAATCAACACTCCACCTTGTG 17283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515144931152320