Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1371 158 8e-34 >seq1371 Length=16595 Score = 158 bits (174), Expect = 8e-34 Identities = 421/633 (67%), Gaps = 13/633 (2%) Strand=Plus/Plus Query 96990 TCTGGCAAACTTTAGTGTTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGC 97049 || ||||| | ||||||||||| || | || || ||| | || ||||| ||| | Sbjct 8581 TCGGGCAATGTGGAGTGTTGGGAAGGGTTTTGGGGTGCGCTTCAGTTGCTCCCGGAGGGG 8640 Query 97050 ATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAAC 97109 || | |||||||| || | |||||||| || | ||||| | || ||||| || Sbjct 8641 TTCTACGTGATTCAAGTAGACATGAGCATCACCGAGGGTGTGCACGAAGTCTCCTGGCTT 8700 Query 97110 TAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGG 97169 | ||| |||| ||||| ||||| | || | |||| |||||| |||||||| || || Sbjct 8701 GAGATCTGTGATTTGGGCAATCATTCGTGTGAGGAGAGCATAGCTGGCAATGTTGAATGG 8760 Query 97170 CACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACA 97229 ||||| |||||||| || ||||| | |||||| | || || || |||| ||||| Sbjct 8761 TACCCCCAGTCCCATGTCGGCTGAACGTTGATACATTTGGCACGAGAGCTCTCCATTGGC 8820 Query 97230 CACATAAAACTGACTCAATACA-TGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGA 97288 ||| || || || ||| || |||||||| || | ||||||| | || | ||| | Sbjct 8821 CACGTAGAATTG-TACAAGGCAGTGACAGGGTGGGAGCGCCATTATGGGGAGATCCACAG 8879 Query 97289 CATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTA 97348 |||||| |||| ||| | |||| | ||| || || || | | || || || | Sbjct 8880 GATTCCATGCACTCATAATGATTCGACGATCAGTGGGCTTCTCGCGGATAAGCTTTATCA 8939 Query 97349 TCTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCT---TGATATT 97405 || || | |||||| || || | || | || | | | ||| | | || Sbjct 8940 CCTCCTGAAGTTGATCCAC-CCCTGGCCGTCGTACGT---ATCACGACATGTACGGTAGG 8995 Query 97406 CTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTAT 97465 || ||||| || | ||||||||||||||||||||| || || || || ||||| | || Sbjct 8996 GGGCACCAAAGTGACGCCATTGGAATCCATAAACAGGCCCCAGATCACCCTCTTCGCGAT 9055 Query 97466 CACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAAT-GTGCACA 97524 | ||| || | || ||| | ||| || | | || ||| |||||| ||| Sbjct 9056 CCTTGAAGCCCATCTCATCCAGATACTCCCGGGTACTGTTACCATTCCAAATGGTGATAC 9115 Query 97525 CCAGATGCTGCAAGCTCT-TTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTC 97583 || ||||| |||||| ||| || ||||| || | || ||||| | | || || Sbjct 9116 CCTTCTGCTG-TAGCTCTCGTGC-ATCCGTAGAGCCGCGTATGAACCAAATAAGCTCCTC 9173 Query 97584 CACAACACCTCTCCAAAATACTCTCTTAGTTGT 97616 ||||||| | ||| || |||||||| || || Sbjct 9174 AGCAACACCGCGCCAGAAGACTCTCTTCGTGGT 9206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346735260809240