Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq2439 138 1e-27 seq825 134 1e-26 seq1176 131 1e-25 seq24 95.1 1e-14 >seq2439 Length=24097 Score = 138 bits (152), Expect = 1e-27 Identities = 689/1090 (63%), Gaps = 28/1090 (3%) Strand=Plus/Minus Query 132879 TCGACGGTAAACTTTGTGGCCTGAGCGGCGGGTTTTGTGCGCAAATAATACATGCCCGTT 132938 || || ||||| | |||| | || || ||||| ||||||||||||||||| |||||| Sbjct 3990 TCCACAGTAAATTGGATGGCATTGGCAGCTGGTTTAGTGCGCAAATAATACATCCCCGTT 3931 Query 132939 TTCAGTTTTTTCTCCCACGCGTAAAAGTGTATGCTCGACACCACCGAGTAAGTGGGTTCG 132998 || || | | ||| || | || || || | | | || | ||||| Sbjct 3930 TTGAGGCCCATTTTCCAGGCATGGAAATGAATTGAAGTGAGTTTCCCATAGTTAGGTTCT 3871 Query 132999 GCGACAAATAAATTCAGCGATTGACTCTGATCTATGAAAGGAGCACGGTCGGCGGCCATG 133058 || || | | || | |||||||| ||||| ||||| | ||||||| || ||||| Sbjct 3870 GCCACGTAAATGTTGAATGATTGACTTTGATCAATGAAGGCCCCACGGTCAGCTGCCATT 3811 Query 133059 TTTATTATACACTTTGATTTGATCTCCCATGCCGTCTTGAAGAGATTCTTGAC-ATGCTG 133117 | || || || ||||| ||||| | || || | | | || || || || Sbjct 3810 TCAATCATTGTTTTCACCTTGATTTCCCACACGGTTTTATACA-ACTCACGAATATCCTC 3752 Query 133118 TGGTATTTCGTCAATGTTCTGCACGGACCCGTTTTCGGCCAAAATCTTGTTGCGCAATTC 133177 || ||||| ||| |||||||| || || || | ||| | | ||||| || ||| Sbjct 3751 AGGAATTTCCAGAATATTCTGCACAGAGCCATTGTTGGCAATTAATTTGTTCTTCATTTC 3692 Query 133178 CGGAGTGTAAATGTCGAGATCGATTAGCGCTTTGACGAGATACTGGTTGACCACTTGAAA 133237 | | ||| | || || || | || | |||| ||| |||||||| || Sbjct 3691 ATCATTCCAAAGGCGTAGTTCAGAGAGATCCTTTAACAGATGGCTGTTAACCACTTGGAA 3632 Query 133238 CTCGCCGGCGAGAACGCGTCTGAGATATACATTCGACGTGAACGGTTCGAAAGATTCGTT 133297 || || | ||||| || | | || | ||| || ||| | |||||||| ||||| || Sbjct 3631 TTCCCCAGAAAGAACACGACGGGTGTACATATTGGATGTGTAGGGTTCGAAGGATTCATT 3572 Query 133298 GTTGCCGAGTATCTGCGCCGTCGTCGCCGTGGGCATGTACGCCACCAACAAAGAGTTTCT 133357 ||||| || || || ||||| | ||||| ||||| ||||| | || || |||| Sbjct 3571 ATTGCCAAGAATTTGAGCCGTAGAAGCCGTTGGCATTGGAGCCACAAGCAGGGAATTTCG 3512 Query 133358 TACGCCGTACTTGTTTATGTTGCACTGCAATTCGTTCCAGTCCCACAGATT-GTTGGAAT 133416 || || | || || || || |||||| | ||| | ||| |||| ||||| Sbjct 3511 AACACCATGCTGAGCAATCTTTGCCTTCAATTCATCCCAATTCCAAAGATCCGTTGG--- 3455 Query 133417 GATAGACGCCGTTCTCGTCGTCGTAGTTGTGAAAATGCAAAATACCCCTGCTCACCGGAC 133476 | |||| || | || | || | |||| ||| ||| |||| || |||| Sbjct 3454 ---------CTTTCTATTCCACATA-TCGT---ACTGCAGAATTCCCTTGCTTACTGGAC 3408 Query 133477 TGTCCGTGTACGATTCATAGGGTCCGTTGATTTTGGCCAGCTCGCAGCTAGCCTCCAAAG 133536 | | |||||| ||||| |||||| | | || ||||| || |||||||| | || Sbjct 3407 TTCCATTGTACGTCTCATATGGTCCGAGCTTCTCAGCGAGCTCACAACTAGCCTCAAGAG 3348 Query 133537 CGGCAAAGTAAATGGTTTCCGCGATTGAATAGTTGACGAACCTGGCATCGTCGCTATCGT 133596 | || ||||||||||||| |||| | ||||| | |||| || | |||||| | Sbjct 3347 CTCCATAGTAAATGGTTTCAAAGATTTGTTGGTTGAGTTTCTTGGCTTCTTTGCTATCAT 3288 Query 133597 AGGCGATGTCGAGAAGAACAAACGCGTCGGCCAAACCCTGTATGCCGACGCCGATGGGTC 133656 | | || | | |||| | || || || | ||| || | || | || || |||| Sbjct 3287 ATGGGAGGCGCATGAGAATGTAAGCATCCGCTAGACCTTGAACTCCAATTCCAATCGGTC 3228 Query 133657 GATGTTTTTTATTGCTCCTCTCCGACTCGGCCGTGGGATAGTGGTTGACGTCGATGATCT 133716 ||| ||||| | || | |||| ||| |||| ||||| ||| || | | Sbjct 3227 TGTGTCGCATATTGGAGCGCTTTGCTTCGGGTACGGGGTAGTAGTTGATGTCTATAACTT 3168 Query 133717 TGTTGAGATTGCGGACGATAATTTTAGTCAAATGTTTCAGCAAAACATAGTCAAATGTCT 133776 ||||||||||||| || ||| || || | || ||| || | ||| | |||| Sbjct 3167 TGTTGAGATTGCGTGTGACAATCTTCGTGACGGACTTTAGCTTCTCAAAATCATACGTCT 3108 Query 133777 TGGCGTCGACGTCGACGCACTTGTTGACGGCAATACTGGCTAGATTACAAACGGCCGTCT 133836 | || | || || || | || | ||||| |||| ||| || || || ||| Sbjct 3107 TATCG-GGCAGT--ACAAACATATTAAGTGCAATTGATGCTAAATTGCACACAGCAATCT 3051 Query 133837 CGTTCTCGTCGCAATACTGGACGATCTCGGCGCAGAGGTTGCTGCATTTGATGGTGCCCA 133896 | | || | |||| | |||||||||| |||||||||||| || || || || | Sbjct 3050 CATCCTTGGACGAATATTCAACGATCTCGGTGCAGAGGTTGCTACAGCGAATTGTACCAA 2991 Query 133897 AAtttttttGATTGCTAAAGTTA---TTGCAATGATCCTTGTATAGCATGTACGGCCCGC 133953 ||| | ||||| || ||| || || |||||||| ||||| |||||| | Sbjct 2990 TATTCTGCTGATTACT---CTTACGGTTACATGCGTCCTTGTACAGCATATACGGCGTTC 2934 Query 133954 CGGTTTCGAC 133963 | ||||| || Sbjct 2933 CCGTTTCTAC 2924 >seq825 Length=38805 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | | || |||||| |||| || ||||| || || |||||||| ||| Sbjct 11868 TACCACCACGAAGACGCAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 11927 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | |||||| |||||| ||||| || || || ||||||||||||||||||| |||| Sbjct 11928 AGAGGGTGCGCCCATCCTCTAGCTGCTTCCCGGCAAAGATGAGACGCTGCTGATCCGGAG 11987 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || ||||| || || |||||| || || | ||| | || |||| | |||| Sbjct 11988 GGATTCCCTCTTTATCCTGAATTTTCGCCTTGACATTTTCAATTGTATCCGAGGGTTCGA 12047 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | ||| | || || || || |||||||| || ||||||||||| Sbjct 12048 CCTCAAGGGTGATGGTCTTCCCCGTGAGAGTTTTCACGAAAATCTGCAT 12096 >seq1176 Length=25388 Score = 131 bits (144), Expect = 1e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||||| ||| || || || || |||||||| ||| || || ||| ||| || Sbjct 17283 CACAAGGTGGAGTGTTGATTCCTTCTGGATGTTGTAGTCGGACAATGTACGCCCATCTTC 17342 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || || ||| ||||||||||||||||||| || || ||||| || ||||| Sbjct 17343 CAGCTGCTTCCCGGCGAAGATGAGACGCTGCTGATCTGGCGGAATGCCTTCTTTGTCCTG 17402 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 |||||| ||| || | |||| ||| || | ||| ||||||| ||| | ||| || Sbjct 17403 AATTTTAGCTTTTACATTCTCGATGGTATCTGACGGCTCAACCTCGAGGGTGATCGTCTT 17462 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || ||||| ||||| |||||||| Sbjct 17463 CCCTGTGAGTGTTTTCACAAAGATCTGCAT 17492 >seq24 Length=280856 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 ||||| || || ||||| ||||||||| | || ||| ||||||||| || || ||| Sbjct 39545 GTAGATTCCTTCTGAATATTGTAATCGGAGAGCGTACGCCCATCCTCGAGTTGCTTGCCA 39486 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| | ||||||||| || || || |||||||||||||| || ||| || Sbjct 39485 GCAAAGATCAAACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTTGCCTTC 39426 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | || || | ||||||||| | || | || || || || | ||| Sbjct 39425 ACATTCTCAATCGTATCAGATGGCTCGACCTCAAGAGTGATGGTCTTACCCGTTAAAGTC 39366 Query 118722 TTTACAAAAATCTGCAT 118738 || ||||| |||||||| Sbjct 39365 TTCACAAAGATCTGCAT 39349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433769426764144