Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq79 122 8e-23 >seq79 Length=216850 Score = 122 bits (134), Expect = 8e-23 Identities = 395/607 (65%), Gaps = 6/607 (1%) Strand=Plus/Plus Query 14186 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 14245 || || || || |||| ||||||||| ||||| || ||||||||||| | ||| || Sbjct 76179 AGGTGCTTGAACATTAGACACGCAAAGTCACAGTGGAGGCCCTCATCGCGTGAAATGAGC 76238 Query 14246 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCG 14305 || || || || | ||| ||||| | || ||| || | ||| || |||| ||| Sbjct 76239 TCATTGCTGAACGTGAGTCCGGGCATGATGCCGCGTGACTTGAGCCAGAAGATTGAGGCG 76298 Query 14306 AATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAAC 14365 || ||| ||||| || ||||||||||| ||||| || || | | ||| || || Sbjct 76299 AAGCTACCGCTGAAGAAAATCCCCTCAACTGCCGCAAAGGCAATGACCCTTTCGCCGAAA 76358 Query 14366 GATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCC 14425 ||||| | | | | ||||| | ||||| || | || || || | | | | Sbjct 76359 TTTGCTTCCTGGCTGGCAATCCACTGGAGTGCCCAATCGGCCTTCTTCTTCACACACGGC 76418 Query 14426 ATTGTTTCAATAGCATTAAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCA 14485 | || || || ||||| || | |||||||| | | | ||||| |||||| Sbjct 76419 AGCGTCTCGATGGCATTGAAGAGGAAGTCCTTCTCCTGCGGATCCCGTATGTACGTATCA 76478 Query 14486 ATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAA 14545 || || || || |||||||| |||| || ||||| || ||||| || ||||| || Sbjct 76479 ATGAGCAAACTGTACATTTCGCTATGTACATTCTCCATGGCAATCTGGAAGCCATAGAAG 76538 Query 14546 CATCTAGCTTCTGACCATTGTACCT-CTGAGTAAAATCTTTCGGCCAAATTTTCATTAAC 14604 ||| || |||| ||| |||| |||| | || | || | | ||| ||||| || Sbjct 76539 AATCGTGCCTCTGTGATTTGCACCTCCTGACT-GAAGCGCTCCACGAGATTCTCATTTAC 76597 Query 14605 TATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCT-TCAT 14663 || ||||| || ||||| ||||||| | || |||| || || || | || Sbjct 76598 AATCCCATCGGATGCCGCAAAGAATGCCAGGACGTGGCTAATGAA--TTTCCTTTCGCAA 76655 Query 14664 TGC-TGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAA 14722 | | | | ||||| | | | |||| || || |||||||| |||||||||||| Sbjct 76656 TCCTTCAAAGCATTCCAGTGATCCATATCCCGGGATAGGTCTACTTCCTCAACTGTCCAA 76715 Query 14723 AAACTAGCAACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACT 14782 || || | || ||||| ||||| |||| | || | ||| || || || || Sbjct 76716 AATGAGGCCTCGGCCTTTTTGTACATCTCCCACACATCGTGGTATTGAATGGGGAAGACA 76775 Query 14783 ACAAATC 14789 ||||||| Sbjct 76776 ACAAATC 76782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482276069881760