Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq2439 282 4e-71 seq79 143 2e-29 >seq2439 Length=24097 Score = 282 bits (312), Expect = 4e-71 Identities = 1155/1792 (64%), Gaps = 58/1792 (3%) Strand=Plus/Minus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 || || || |||| || | ||| | || | ||| || | || ||||||||| || ||| Sbjct 3990 TCCACAGTAAATTGGATGGCATTGGCAGCTGGTTTAGTGCGCAAATAATACATCCCCGTT 3931 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909 || || |||| | |||| | | ||||| || || ||||| | || |||| | Sbjct 3930 TTGAGGCCCATTTTCCAGGCATGGAAATGAATTGAAGTGAGTTTCCCATAGTTAGGTTCT 3871 Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATT 36969 | | || || | | ||||||||||||||| || || || || | ||| ||||||||| Sbjct 3870 GCCACGTAAATGTTGAATGATTGACTTTGATCAATGAAGGCCCCACGGTCAGCTGCCATT 3811 Query 36970 TCTAAAATACATT--TTTGAGAT--ATCTCCCAAACCGTTTTATATATTTGTTTTATATT 37025 || ||| |||| ||| | | || ||||| || |||||||| | | |||| Sbjct 3810 TC---AAT-CATTGTTTTCACCTTGATTTCCCACACGGTTTTATACAACTCACGAATATC 3755 Query 37026 ATCTGGTAAATCTA-AATGTT--GAATAGAACCATTAT-GTAACACAATTGTATTCTTTA 37081 || || | || | ||| || | | ||| ||||| | | | |||| | ||||| | Sbjct 3754 CTCAGGAATTTCCAGAATATTCTGCACAGAGCCATTGTTGGCAATTAATT-TGTTCTTCA 3696 Query 37082 TGTCATTATTCCACA----TATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACA 37137 | |||| |||||| | || ||| || || | || || || || || Sbjct 3695 TTTCATCATTCCAAAGGCGTAGTTCAGAG----AGATCCTTTAACAGATGGCTGTTAACC 3640 Query 37138 ACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATG 37197 || || || || ||||| | || | | || || |||||| || || ||||| | | Sbjct 3639 ACTTGGAATTCCCCAGAAAGAACACGACGGGTGTACATATTGGATGTGTAGGGTTCGAAG 3580 Query 37198 GACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGG 37257 || |||||||| | | ||||||| ||||| || || |||||||| || | || ||| Sbjct 3579 GATTCATTATTGCCAAGAATTTGAGCCGTAGAAGCCGTTGGCATTGGAGCCACAAGCAGG 3520 Query 37258 CTATTTCTCAATCCATGTGTATTAATTCTCTTT---TTTAGTTCATTCCAATCCCATAAA 37314 ||||| | ||||| | ||| |||| || | ||||| ||||| ||| | | Sbjct 3519 GAATTTCGAACACCATGCTGAGCAAT---CTTTGCCTTCAATTCATCCCAATTCCAAAGA 3463 Query 37315 TCTGTTGGGTTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCG 37374 || ||||| || | ||||||||| || || ||||| || || || ||||| | Sbjct 3462 TCCGTTGGCTTTCTATTCCACATATCGTACTGCAGAATTCCCTTGCTTACTGGACTTCCA 3403 Query 37375 TTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCA 37434 || || |||||||| |||||| | | ||| || || ||||||| || || || || Sbjct 3402 TTGTACGTCTCATATGGTCCGAGCTTCTCAGCGAGCTCACAACTAGCCTCAAGAGCTCCA 3343 Query 37435 TAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCA 37494 || || || ||||| || |||||| || | | | || ||||||| |||||| ||| Sbjct 3342 TAGTAAATGGTTTCAAAGATTTGTTGGTTGAGTTTCTTGGCTTCTTTGCTATCATATGGG 3283 Query 37495 TAGCCCA--ATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTAT 37552 || || | ||| ||| || || || | ||| ||||| || || || || ||||| | Sbjct 3282 AGGCGCATGAGAATGTAAGCA--TCCGCTAGACCTTGAACTCCAATTCCAATCGGTCTGT 3225 Query 37553 GTTTCTTATTAGATCTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTAT 37612 || | |||| || | | ||| || || || || ||||| ||||| | ||| | Sbjct 3224 GTCGCATATTGGAGCGCTTTGCTTCGGGTACGGGGTAGTAGTTGATGTCTATAACTTTGT 3165 Query 37613 TTAGATT---TTTAACTAGTATTTTCGTAATTATTCTCAACTTGTCGAACATAAATACGT 37669 | ||||| | | || | | ||||| | | | ||| || || || | ||||| Sbjct 3164 TGAGATTGCGTGTGACAA---TCTTCGTGACGGACTTTAGCTTCTCAAA-ATCA-TACGT 3110 Query 37670 TATTATTA------ACAAATTTACTCAACGAAATAGATCCTAGATTACATACAGCAACTT 37723 |||| ||||| || | | | ||| ||| ||| ||| || ||||||| | Sbjct 3109 C-TTATCGGGCAGTACAAACATATTAAGTGCAATTGATGCTAAATTGCACACAGCAATCT 3051 Query 37724 CATCTTCGTTACTAA-ATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCC 37782 |||| | | || || ||| | ||||| || ||||| || || | | |||||| || Sbjct 3050 CATCCTTGG-ACGAATATTCAACGATCTCGGTGCAGAGGTTGCTACAGCGAATTGTACCA 2992 Query 37783 AAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCT 37842 | ||| ||||| || ||||| | || || || || |||||||||||||| Sbjct 2991 ATATTCTGCTGATTACTCTTACGGTTACATGCGTCCTTGTACAGCATATACGGCGTTCCC 2932 Query 37843 TGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAACGAT-CGCTT- 37900 ||||| |||| | || || | ||| | | || ||| || | || | Sbjct 2931 GTTTCTACTTGACTTTGAATGATGGCAAACCAAAGATCTCGAGCTGGTACCTTACGAATG 2872 Query 37901 TAAtttttttCTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACAT 37960 || | |||| | |||||| | | | || ||||| ||||| || | ||||| || Sbjct 2871 TACTGACCTTCT--GCTTCGTACTTTGTGTACAATTTATTAAATTCTTCACCCCAGCAAT 2814 Query 37961 CGCATAATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGC 38020 | | ||||| || || | | || ||||| ||| |||||| |||| | || | Sbjct 2813 CAAACAATCCAGGGCACTTGTTAGGGCACATGAGACTCCATTCACCATCCTCGGAGACAC 2754 Query 38021 GTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTT 38080 | | ||||||||||||||| | ||| | ||| || | |||| | || | || Sbjct 2753 GCTGCATAAATAAATCAGGAATCCAGAGCGCATAGAAGAGATCTCGTGCTCGTGCCTTTT 2694 Query 38081 CGTTCCCTACATTCTTTCTTAAGCT-TAGAAAATCGAATATATCAGCGTGCCATGGTTCT 38139 | || || ||||||| ||||| | ||| || || || ||||| | ||||| ||||| Sbjct 2693 CCTTACCGGTATTCTTT-TTAAGGTCTAGGAATTCAAAGATATCCCCATGCCAGGGTTCA 2635 Query 38140 ATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTG 38199 | || || | | || ||||| | |||| || || |||| || || | | || Sbjct 2634 AGGTATATTGCAAAGGCACCTGGGCGCTTATTCCCACCTTGATCAACGTAGCAGGCAGTA 2575 Query 38200 TTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATA 38259 | || || | | | ||| ||||| | ||||| ||| |||| || | || | || Sbjct 2574 GTGTTGTAGACGCGAAGCATCGGTACGAGTCCATTCGATGTGCCATTGGTTCCAGCAATG 2515 Query 38260 TAAGTACCCTTAGCTCGTAT--ATTACTTATCGACAATCCTATTCCACCTGCATGTTTTG 38317 | | |||| |||||| || | | ||| ||| || || || |||||| |||| Sbjct 2514 TGACTACCACGAGCTCGAATGCAGTGAGTATTAACA--CCAATCCCTCCTGCAGACTTTG 2457 Query 38318 ATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTG 38377 | |||| |||||||||||| | ||||| | ||||| || ||||||||||| || | Sbjct 2456 AGATTAGAGCGCATTGTTTCAGTGTATCGTAGATACCATCAATACTGTCATCAGCCATGG 2397 Query 38378 GTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAG 38437 || | |||||| || | ||||||| |||||| | || ||| | ||| || | Sbjct 2396 ACAGGAGGAAACAAGACGATAGCTGAGGCACTGGAGTGGCAGCTGCAAAGAGTGTTGGTG 2337 Query 38438 ATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATAT 38497 |||| || |||| | || || | | || || || || || | || | || | Sbjct 2336 ATGCGTGCGTGAAATACCGTTGTGATAGAAGGTTGTACGTCTCAATGGCTGCAGCAATGT 2277 Query 38498 CACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549 || |||||||| || | |||||| | ||| |||||||| || || ||||| Sbjct 2276 CATTCCCGTGAATTCCCACAGATACTCGCATCAGCATATGCTGGGGCCTTTC 2225 >seq79 Length=216850 Score = 143 bits (158), Expect = 2e-29 Identities = 488/754 (65%), Gaps = 11/754 (1%) Strand=Plus/Plus Query 11464 ATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATAAGATCCAC 11523 |||||| |||||||| || ||||| ||||| | |||||||| || | | || || Sbjct 76031 ATCTGCCACGAATTCAATGTACTGCGACATGAGTTGGCAATTCATGCCCAGCATGTCAAC 76090 Query 11524 CGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATC---AATGATTATCGA 11580 |||| ||| |||| | || |||| || || | || || || ||||||| |||| Sbjct 76091 AGGAAGGGCATCTGTGAGGAATTCCTGCTCAATGGTCACAGCTTCGCGAATGATT-TCGA 76149 Query 11581 CGTTATAACTTCCTTAGATGGTGGATGTAATAAATGTTTAAACATTAAACACGCAAAATC 11640 | || ||||| || || || | | || || ||||||| ||||||||| || Sbjct 76150 TG--ATGCGCTCCTTTGAGGGCTTCTGCACGAGGTGCTTGAACATTAGACACGCAAAGTC 76207 Query 11641 ACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAA 11700 ||| || | || || || | || || ||||| || || | ||||||||| | Sbjct 76208 ACAGTGGAGGCCCTCATCGCGTGAAATGAGCTCATTGCTGAACGTGAGTCCGGGCATGAT 76267 Query 11701 TCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCAC 11760 || ||| || | ||| || || | || || ||| ||||| || ||||| || Sbjct 76268 GCCGCGTGACTTGAGCCAGAAGATTGAGGCGAAGCTACCGCTGAAGAAAATCCCCTCAAC 76327 Query 11761 AGCTGCAAATGCTACTACTCTTTCTCC---ATATACCTTGTTGCTAGATATCCATTTTCT 11817 || ||||| || | || ||||| || || | | | | ||| | ||||| | Sbjct 76328 TGCCGCAAAGGCAATGACCCTTTCGCCGAAATTTGCTTCCTGGCTGGCAATCCACTGGAG 76387 Query 11818 GGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGTTAAATAA-ATGCA 11876 |||||||| || ||||| || || || || || || || || || || | | | Sbjct 76388 TGCCCAATCGGCCTTCTTCTTCACACACGGCAGCGTCTCGATGGCATTGAAGAGGAAGTC 76447 Query 11877 TTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTATACATTTCTGAATGAA 11936 || | || ||| | || || ||||| || | ||||| |||||||| ||| | Sbjct 76448 CTTCTCCTGCGG-ATCCCGTATGTACGTATCAATGAGCAAACTGTACATTTCGCTATGTA 76506 Query 11937 TATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACACTGTACATCCA 11996 ||| ||||| || || || || |||||||| |||||||||||| || || ||| Sbjct 76507 CATTCTCCATGGCAATCTGGAAGCCATAGAAGAATCGTGCCTCTGTGATTTGCACCTCCT 76566 Query 11997 CATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGATGCAAAAAATGCTA 12056 | || | ||| | | ||||||||||||||| ||||| | ||||| ||||| | Sbjct 76567 GACTGAAGCGCTCCACGAGATTCTCATTTACAATCCCATCGGATGCCGCAAAGAATGCCA 76626 Query 12057 GTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTAATTTATCCCAATCATCTAAATCTT 12116 | | || | || || | ||||| | | || || ||| | ||| | ||| Sbjct 76627 GGACGTGGCTAATGAATTTCCTTTCGCAATCCTTCAAAGCATTCCAGTGATCCATATCCC 76686 Query 12117 TTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCACTGATTGTTTATACATTTTCC 12176 |||| |||||||| ||||| |||||||| ||| | | | ||| ||||| | || Sbjct 76687 GGGATAGGTCTACTTCCTCAACTGTCCAAAATGAGGCCTCGGCCTTTTTGTACATCTCCC 76746 Query 12177 AGATATCATGATACTTAATAGGGAAAATAACGAA 12210 | | ||| || || | ||| ||||| | ||| || Sbjct 76747 ACACATCGTGGTATTGAATGGGGAAGACAACAAA 76780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468457262150080