Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq2439 414 1e-110 seq79 203 4e-47 >seq2439 Length=24097 Score = 414 bits (458), Expect = 1e-110 Identities = 1227/1866 (66%), Gaps = 68/1866 (4%) Strand=Plus/Minus Query 64830 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 64889 || |||| || ||||| |||| | || || ||||| || || | ||| ||||| ||| Sbjct 3993 TTATCCACAGTAAATTGGATGGCATTGGCAGCTGGTTTAGTGCGCAAATAATACATCCCC 3934 Query 64890 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGA 64949 ||||| || || | |||| | | ||||| || || ||||| ||| | || Sbjct 3933 GTTTTGAGGCCCATTTTCCAGGCATGGAAATGAATTGAAGTGAGTTTCCCATAGTTAGGT 3874 Query 64950 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 65009 ||||| | | || || | |||||||||||||| |||||||| || | ||| || ||| Sbjct 3873 TCTGCCACGTAAATGTTGAATGATTGACTTTGATCAATGAAGGCCCCACGGTCAGCTGCC 3814 Query 65010 ATTTTTATGATCGTCTT----TTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAA 65064 |||| || || || || ||| |||||||| | |||||||| ||||| | || Sbjct 3813 ATTTCAATCATTGTTTTCACCTTG----ATTTCCCACACGGTTTTATACAACTCACG-AA 3759 Query 65065 TATCTTCTGGAAGGTTTG-----TATTCTGAATGGATCCACCATCTGCCATAATCCTATT 65119 |||| || |||| ||| ||||||| | || ||| | || || | | || Sbjct 3758 TATCCTCAGGAA--TTTCCAGAATATTCTGCACAGAGCCATTGTTGGCAATTAATTTGTT 3701 Query 65120 CTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAAC 65179 ||| || ||||||||||| | | || | | | | | | ||||| ||||| Sbjct 3700 CTTCATTTCATCATTCCAAAGGCGTAGTTCAGAGAGATCCTTTAACAGATGGCTGTTAAC 3641 Query 65180 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 65239 ||||| ||||| ||||| | || | || ||||| ||||| || || ||||| | Sbjct 3640 CACTTGGAATTCCCCAGAAAGAACACGACGGGTGTACATATTGGATGTGTAGGGTTCGAA 3581 Query 65240 AGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 65299 || |||||||| || | ||||||||| || || || || ||||| || ||||| | | Sbjct 3580 GGATTCATTATTGCCAAGAATTTGAGCCGTAGAAGCCGTTGGCATTGGAGCCACAAGCAG 3521 Query 65300 ACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGA 65357 ||||| || ||| ||| | | || || | || | ||||||||||||||| Sbjct 3520 GGAATTTCGAACACC--ATGCTGAGCAATCTTTGCCTTCAATTCATCCCAATTCCAAAGA 3463 Query 65358 TCCGACGG--TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTT----ACTGGCGTAC 65411 |||| || | | | || ||||| || || ||||| | | Sbjct 3462 TCCGTTGGCTTTCTATTCCACATATCGTAC--TGCAGAATTCCCTTGCTTACTGGACTTC 3405 Query 65412 GATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 65471 || ||| || || |||||||| ||||||||| || |||||||| ||||| | Sbjct 3404 CATTGTAC----GTCTCATATGGTCCGAGCTTCTCAGCGAGCTCACAACTAGCCTCAAGA 3349 Query 65472 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAG-ATCTTGTGCTTCCAGGCTATC 65530 || || || ||||||||||| ||||| | | || || ||||| ||||| |||||| Sbjct 3348 GCTCCATAGTAAATGGTTTCAAAGATTTGTTGGTTGAGTTTCTTG-GCTTCTTTGCTATC 3290 Query 65531 AAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGG 65590 | |||| | |||||| | || || |||| |||||||| ||||| || || || Sbjct 3289 ATATGGGAGGCGCATGAGAATGTAAGCATCCGCTAGACCTTGAACTCCAATTCCAATCGG 3230 Query 65591 TCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAAT 65650 ||| |||| | |||| ||| | ||||| || | || || || || || ||||||| Sbjct 3229 TCTGTGTCGCATATTGGAGCGCTTTGCTTCGGGTACGGGGTAGTAGTTGATGTCTATAAC 3170 Query 65651 TTTATTGAGATT---TCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA 65707 ||| |||||||| | ||||||| ||| | || ||| || || ||||||| | Sbjct 3169 TTTGTTGAGATTGCGTGTGACAAT--CTTCG-TGACGGACTTTAGCTTCTCAAAATCATA 3113 Query 65708 TCGCTCATC---TATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTAC 65764 || ||| | ||||||||| || | ||||| ||||| | ||| || || || | Sbjct 3112 CGTCTTATCGGGCAGTACAAACATATTAAGTGCAATTGATGCTAAATTGCACACAGCAAT 3053 Query 65765 CTCAT--TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTT 65822 ||||| | | | || ||||| | ||||| ||||| || || ||||| || || Sbjct 3052 CTCATCCTTGGA--CGAATATTCAACGATCTCGGTGCAGAGGTTGCTACAGCGAATTGTA 2995 Query 65823 CCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTA 65882 || | ||| || ||||||||||| |||||| || ||||| || || || | || || Sbjct 2994 CCAATATTCTGCTGATTACTCTTACGGTTACATGCGTCCTTGTACAGCATATACGGCGTT 2935 Query 65883 CCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGAT 65942 || ||||| | ||| || || || || ||| | ||||||| || || Sbjct 2934 CCCGTTTCTACTTGACTTTGAATGATGGCAAACCAAAGATCTCGAGCTGGTACCTTACGA 2875 Query 65943 TTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACA 66002 |||| |||| |||||| ||| |||||| | || || || ||||| | Sbjct 2874 ATGTACTGACCTTCTGCTTCGTACTTTGTGTACAATTTATTAAATTCTTCACCCCAGCAA 2815 Query 66003 TTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACT 66062 | ||||||||| || | | || ||||| | ||| || || || || || Sbjct 2814 TCAAACAATCCAGGGCACTTGTTAGGGCACATGAGACTCCATTCACCATCCTCGGAGACA 2755 Query 66063 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAAATCTCTGGTTCTATGTTC 66121 || | |||||| | |||||||||||| || || ||| || | ||||| || || || | Sbjct 2754 CGCTGCATAAATAAATCAGGAATCCAGAGCGC-ATAGAAGAGATCTC--GTGCT-CGTGC 2699 Query 66122 C---TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGG 66178 | || || || |||||||||||||| || ||||| | | ||||| |||||| || Sbjct 2698 CTTTTCCTTACCGGTATTCTTTTTAAGGTCTAGGAATTCAAAGATATCCCCATGCCAGGG 2639 Query 66179 TTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 66238 ||| | |||||| || | | || || || || || || || ||||| | ||| | || Sbjct 2638 TTCAAGGTATATTGCAAAGGCACCTGGGCGCTTATTCCCACCTTGATCAACGTAGCAGGC 2579 Query 66239 GGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGA 66298 || | || || || | | ||| || | | ||||| ||||| |||||||| || | Sbjct 2578 AGTAGTGTTGTAGACGCGAAGCATCGGTACGAGTCCATTCGATGTGCCATTGGTTCCAGC 2519 Query 66299 GATATAGCTTCCACTTGCACGAATATTACTAATTGAT-AGACCTATTCCCCCTGCCATTT 66357 || | || |||| || ||||| | | | | | | ||| || || ||||| | Sbjct 2518 AATGTGACTACCACGAGCTCGAAT-GCAGTGAGTATTAACACCAATCCCTCCTGCAGACT 2460 Query 66358 TAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCA 66417 | ||||||| |||||| |||| | ||||| ||||| || || ||||| ||||| || Sbjct 2459 TTGAGATTAGAGCGCATTGTTTCAGTGTATCGTAGATACCATCAATACTGTCATCAGCCA 2400 Query 66418 TGTTAAGTAGAAAACAGCTAGACATTTGGTGACG-ACT--AGTTCCCGCATTAAATAAGG 66474 || || || ||||| |||| | | ||| | ||| ||| | || ||| | | Sbjct 2399 TGGACAGGAGGAAACA---AGACGATAGCTGAGGCACTGGAGTGGCAGCTGCAAAGAGTG 2343 Query 66475 TAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGT 66534 | || || |||||||| || | || || || || |||||||||||||| |||| Sbjct 2342 TTGGTGATGCGTGCGTGAAATACCGTTGTGATAGAAGGTTGTACGTCTCAATGGCTGCAG 2283 Query 66535 CTATATCCCATT--GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTC 66592 | || | |||| |||||||| || | || ||||| | ||| ||||| || ||||| Sbjct 2282 CAATGT--CATTCCCGTGAATTCCCACAGATACTCGCATCAGCATATGCTGGGGCCTTTC 2225 Query 66593 AACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATA 66652 | |||| || | || |||| || || ||| | || | || || || |||||||| Sbjct 2224 AGCGATTTTCCCGCCGATCTTCATTAAATATGATCTCTCGAGTGTCTTGAAGCCAAAATA 2165 Query 66653 GTTGTA 66658 | |||| Sbjct 2164 GCTGTA 2159 >seq79 Length=216850 Score = 203 bits (224), Expect = 4e-47 Identities = 407/601 (68%), Gaps = 3/601 (0%) Strand=Plus/Plus Query 36143 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 36202 || || ||||| | ||| || || || ||||| || ||||| || | ||| | || Sbjct 76182 TGCTTGAACATTAGACACGCAAAGTCACAGTGGAGGCCCTCATCGCGTGAAATGAGCTCA 76241 Query 36203 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 36262 ||| ||||||||||||||||| | ||| || || ||||| || || || || || Sbjct 76242 TTGCTGAACGTGAGTCCGGGCATGATGCCGCGTGACTTGAGCCAGAAGATTGAGGCGAAG 76301 Query 36263 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCG 36322 || |||||||| || || ||||||||||||||||| | || || || || Sbjct 76302 CTACCGCTGAAGAAAATCCCCTCAACTGCCGCAAAGGCAATGACCCTTTCGCCGAAATTT 76361 Query 36323 GC--ACTGTCATG-TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATT 36379 || ||| | | ||||||| | ||||||||||||||||| || ||||| |||| Sbjct 76362 GCTTCCTGGCTGGCAATCCACTGGAGTGCCCAATCGGCCTTCTTCTTCACACACGGCAGC 76421 Query 36380 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATC 36439 ||||| || ||||| ||||| ||| || || | ||| | || |||||||| Sbjct 76422 GTCTCGATGGCATTGAAGAGGAAGTCCTTCTCCTGCGGATCCCGTATGTACGTATCAATG 76481 Query 36440 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACAT 36499 | | ||| |||||||| ||| | || || ||||| || || || || ||||| || Sbjct 76482 AGCAAACTGTACATTTCGCTATGTACATTCTCCATGGCAATCTGGAAGCCATAGAAGAAT 76541 Query 36500 CTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATT 36559 | ||||| || || || || || || || || || | | ||| ||||| || || Sbjct 76542 CGTGCCTCTGTGATTTGCACCTCCTGACTGAAGCGCTCCACGAGATTCTCATTTACAATC 76601 Query 36560 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTT 36619 || || || ||||| || |||| || || | || || | ||||| | Sbjct 76602 CCATCGGATGCCGCAAAGAATGCCAGGACGTGGCTAATGAATTTCCTTTCGCAATCCTTC 76661 Query 36620 AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGAT 36679 | |||||| | || ||||| |||| || ||||| || |||||||||||||| Sbjct 76662 AAAGCATTCCAGTGATCCATATCCCGGGATAGGTCTACTTCCTCAACTGTCCAAAATGAG 76721 Query 36680 GCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAAT 36739 ||||| |||||||| ||||| | ||| | || || |||||||| || || | ||||||| Sbjct 76722 GCCTCGGCCTTTTTGTACATCTCCCACACATCGTGGTATTGAATGGGGAAGACAACAAAT 76781 Query 36740 C 36740 | Sbjct 76782 C 76782 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 36625 ATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTC 36684 |||||| | || ||||| |||| || ||||| || |||||||||||||| ||||| Sbjct 78676 ATTCCAGTGATCCATATCCCGGGATAGGTCTACTTCCTCAACTGTCCAAAATGAGGCCTC 78735 Query 36685 TGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATC 36740 |||||||| ||||| | ||| | || || |||||||| || || | |||||||| Sbjct 78736 GGCCTTTTTGTACATCTCCCACACATCGTGGTATTGAATGGGGAAGACAACAAATC 78791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658077924390880