Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq1371 158 1e-33 >seq1371 Length=16595 Score = 158 bits (174), Expect = 1e-33 Identities = 300/438 (68%), Gaps = 13/438 (3%) Strand=Plus/Plus Query 20925 AGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCC 20984 ||||| || ||||| || ||| || || || ||||| | ||||||||| |||||||| Sbjct 8636 AGGGGTTCTACGTGATTCAAGTAGACATGAGCATCACCGAGGGTGTGCACGAAGTCTCCT 8695 Query 20985 GGGGTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTA 21044 || | || | |||| || || |||| || ||||| || |||||||| ||||| Sbjct 8696 GGCTTGAGATCTGTGATTTGGGCAATCATTCGTGTGAGGAGAGCATAGCTGGCAATGTTG 8755 Query 21045 AACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCC 21104 || || ||||| || ||||||||||| || | || |||| ||||| || ||||| || Sbjct 8756 AATGGTACCCCCAGTCCCATGTCGGCTGAACGTTGATACATTTGGCACGAGAGCTCTCCA 8815 Query 21105 CGAGCCACGTAAAACTGACACAAAAC-GTGACAAGGAGGGAGAGCCATCCGCGCGAGGTC 21163 |||||||| || || |||| | |||||| || ||||| ||||| | ||| || Sbjct 8816 TTGGCCACGTAGAATTG-TACAAGGCAGTGACAGGGTGGGAGCGCCATTATGGGGAGATC 8874 Query 21164 CGCGGGGTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAGATC 21223 | | || ||||| || | ||||| ||| || ||||| |||| | | || || | Sbjct 8875 CACAGGATTCCATGCACTCATAATGATTCGACGATCAGTGGGCTTCTCGCGGATAAGCTT 8934 Query 21224 CACCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTA 21283 | ||| | | || || |||| |||||| || ||||| ||| | | |||| Sbjct 8935 TATCACCTCCTGAAGTTGATCCA-CCCCTGGCCGTCGTA-----CGTATCACGACATGTA 8988 Query 21284 C-----TCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCG 21338 | || ||||| || | ||| ||||| || || || ||||||||||| ||||| Sbjct 8989 CGGTAGGGGGCACCAAAGTGACGCCATTGGAATCCATAAACAGGCCCCAGATCACCCTCT 9048 Query 21339 CGGCGGTCCCCGAAGCCC 21356 ||| ||| ||||||| Sbjct 9049 TCGCGATCCTTGAAGCCC 9066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427715877687360