Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq2439 473 2e-128 seq79 214 3e-50 >seq2439 Length=24097 Score = 473 bits (524), Expect = 2e-128 Identities = 1236/1857 (67%), Gaps = 50/1857 (3%) Strand=Plus/Minus Query 78709 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 78768 || |||| || ||||| |||| | || || ||||| || || | ||| ||||| ||| Sbjct 3993 TTATCCACAGTAAATTGGATGGCATTGGCAGCTGGTTTAGTGCGCAAATAATACATCCCC 3934 Query 78769 GTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGA 78828 ||||| || || | |||| | | |||||| || || ||||| ||| | || Sbjct 3933 GTTTTGAGGCCCATTTTCCAGGCATGGAAATGAATTGAAGTGAGTTTCCCATAGTTAGGT 3874 Query 78829 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 78888 ||||| | | || || | |||||||||||||| |||||||| || | ||| || ||| Sbjct 3873 TCTGCCACGTAAATGTTGAATGATTGACTTTGATCAATGAAGGCCCCACGGTCAGCTGCC 3814 Query 78889 ATTTTTATGATCGTCTT----TTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAA 78943 |||| || || || || ||| |||||||| | |||||||| ||||| | || Sbjct 3813 ATTTCAATCATTGTTTTCACCTTG----ATTTCCCACACGGTTTTATACAACTCACG-AA 3759 Query 78944 TATCTTCTGGAAGGTTTG-----TATTCTGAATGGATCCACCATCTGCCATAATCCTATT 78998 |||| || |||| ||| ||||||| | || ||| | || || | | || Sbjct 3758 TATCCTCAGGAA--TTTCCAGAATATTCTGCACAGAGCCATTGTTGGCAATTAATTTGTT 3701 Query 78999 CTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAAC 79058 ||| || || |||||||| | | || | | | | | | ||||| ||||| Sbjct 3700 CTTCATTTCATCATTCCAAAGGCGTAGTTCAGAGAGATCCTTTAACAGATGGCTGTTAAC 3641 Query 79059 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCAC 79118 ||||| ||||| ||||| | || | || ||||| ||||| || || ||||| | Sbjct 3640 CACTTGGAATTCCCCAGAAAGAACACGACGGGTGTACATATTGGATGTGTAGGGTTCGAA 3581 Query 79119 CGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAA 79178 ||||||||||| || | ||||||||| || || ||||||||||| || ||||| | | Sbjct 3580 GGATTCATTATTGCCAAGAATTTGAGCCGTAGAAGCCGTTGGCATTGGAGCCACAAGCAG 3521 Query 79179 ACTATTTCTAAGACCGTA-TGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGAT 79237 ||||| || ||| | ||| | ||| ||| | || |||||| |||||||| Sbjct 3520 GGAATTTCGAACACCATGCTGAGCAATCTTTGCCTTCAATTCAT-CCCAATTCCAAAGAT 3462 Query 79238 CAGACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTG 79297 | | || |||||| | ||| || || ||||| || || || | ||| Sbjct 3461 CCGTTGGCTTTCTATTCCACATATCGTACTGCAGAATTCCCTTGCTTACTGGACTTCCAT 3402 Query 79298 TGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGT 79357 |||| || ||||| ||||| ||| || || | |||||||| ||||| | ||||| | Sbjct 3401 TGTACGTCTCATATGGTCCGAGCTTCTCAGCGAGCTCACAACTAGCCTCAAGAGCTCCAT 3342 Query 79358 AATAAATGGTTTCGAAAATCTTCTTATTGAG-ATCTTGTGCTTCTAGGCTATCAAATGGA 79416 | ||||||||||| || || | | ||||| ||||| |||||| ||||||| |||| Sbjct 3341 AGTAAATGGTTTCAAAGATTTGTTGGTTGAGTTTCTTG-GCTTCTTTGCTATCATATGGG 3283 Query 79417 TAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGT 79476 | |||||| | || || |||| |||||||| ||||| || || ||||| ||| Sbjct 3282 AGGCGCATGAGAATGTAAGCATCCGCTAGACCTTGAACTCCAATTCCAATCGGTCTGTGT 3223 Query 79477 CTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTG 79536 | | |||| || | ||||| || | || || || || || ||||||| ||| ||| Sbjct 3222 CGCATATTGGAGCGCTTTGCTTCGGGTACGGGGTAGTAGTTGATGTCTATAACTTTGTTG 3163 Query 79537 AGATTCC---TGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTC-C 79592 ||||| | |||| || ||| | || |||||| || ||||||| | |||| Sbjct 3162 AGATTGCGTGTGACAAT--CTTCG-TGACGGACTTTAGCTTCTCAAAATCATA-CGTCTT 3107 Query 79593 ATC---TATTACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCAT- 79648 ||| | ||||||||| || | || | ||||| | ||| || || || | ||||| Sbjct 3106 ATCGGGCAGTACAAACATATTAAGTGCAATTGATGCTAAATTGCACACAGCAATCTCATC 3047 Query 79649 -TAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAA 79707 | | | || ||||| | || || ||||||||||| ||||| ||| || || | | Sbjct 3046 CTTGGA--CGAATATTCAACGATCTCGGTGCAGAGGTTGCTACAGCGAATTGTACCAATA 2989 Query 79708 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTT 79767 || || ||||||||||| |||||| || ||||| || || || |||| || || ||| Sbjct 2988 TTCTGCTGATTACTCTTACGGTTACATGCGTCCTTGTACAGCATATACGGCGTTCCCGTT 2929 Query 79768 TCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTAT 79827 || | ||| || || || || ||| | ||||||| || || |||| Sbjct 2928 TCTACTTGACTTTGAATGATGGCAAACCAAAGATCTCGAGCTGGTACCTTACGAATGTAC 2869 Query 79828 CTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCT 79887 |||| |||||| | ||| || ||| | || || || ||||| ||| Sbjct 2868 TGACCTTCTGCTTCGTACTTTGTGTACAATTTATTAAATTCTTCACCCCAGCAATCAAAC 2809 Query 79888 AATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTC 79947 |||||||| || | || ||| ||||| | ||| || ||||| || || || | | Sbjct 2808 AATCCAGGGCACTTGTTAGGGCACATGAGACTCCATTCACCATCCTCGGAGACACGCTGC 2749 Query 79948 ATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTT 80006 ||||| | |||||||||||| || || ||| || ||||||| | || || || || Sbjct 2748 ATAAATAAATCAGGAATCCAGAGCGC-ATAGAAGAGATCTCGTGCTCGTGCCTTTTCCTT 2690 Query 80007 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 80066 || |||||||||||||| || ||||| | | ||||| |||||| ||||| | ||| Sbjct 2689 ACCGGTATTCTTTTTAAGGTCTAGGAATTCAAAGATATCCCCATGCCAGGGTTCAAGGTA 2630 Query 80067 TATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 80126 ||| || | | || || || || || || || ||||| | ||| | || || | || Sbjct 2629 TATTGCAAAGGCACCTGGGCGCTTATTCCCACCTTGATCAACGTAGCAGGCAGTAGTGTT 2570 Query 80127 ATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCT 80186 || || | | ||| || | | ||||| ||||| |||||||| || | || | || Sbjct 2569 GTAGACGCGAAGCATCGGTACGAGTCCATTCGATGTGCCATTGGTTCCAGCAATGTGACT 2510 Query 80187 TCCACTGGCACGAATATTACTAATTGAT-AGACCTATTCCCCCTGCCATTTTAGAGATTA 80245 |||| || ||||| | | | | | | ||| || || ||||| || ||||||| Sbjct 2509 ACCACGAGCTCGAAT-GCAGTGAGTATTAACACCAATCCCTCCTGCAGACTTTGAGATTA 2451 Query 80246 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTA 80305 |||||| |||| | ||||| ||||| || || || || |||||| |||| || | Sbjct 2450 GAGCGCATTGTTTCAGTGTATCGTAGATACCATCAATACTGTCATCAGCCATGGACAGGA 2391 Query 80306 GAAAACAGCTAGACATTTGGTGACG-ACT--AGTTCCCGCATTAAATAAGGTAGGAGAAG 80362 | ||||| |||| | | ||| | ||| ||| | || ||| | || || || | Sbjct 2390 GGAAACA---AGACGATAGCTGAGGCACTGGAGTGGCAGCTGCAAAGAGTGTTGGTGATG 2334 Query 80363 CGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCC 80422 ||||||| || | || || || || |||||||||||||| |||| | || | | Sbjct 2333 CGTGCGTGAAATACCGTTGTGATAGAAGGTTGTACGTCTCAATGGCTGCAGCAATGT--C 2276 Query 80423 ATT--GATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTT 80480 ||| |||||||| || | || ||||| | ||| ||||| || |||||| |||| || Sbjct 2275 ATTCCCGTGAATTCCCACAGATACTCGCATCAGCATATGCTGGGGCCTTTCAGCGATTTT 2216 Query 80481 GTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 80537 || |||| || || ||| | || | || || || ||||||||| |||| Sbjct 2215 CCCGCCGATCTTCATTAAATATGATCTCTCGAGTGTCTTGAAGCCAAAATAGCTGTA 2159 >seq79 Length=216850 Score = 214 bits (236), Expect = 3e-50 Identities = 410/604 (68%), Gaps = 9/604 (1%) Strand=Plus/Plus Query 49945 TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCG 50004 || || ||||| | ||| || || || ||||| || ||||| || | ||| || || Sbjct 76182 TGCTTGAACATTAGACACGCAAAGTCACAGTGGAGGCCCTCATCGCGTGAAATGAGCTCA 76241 Query 50005 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 50064 ||| ||||||||||||||||| | ||| || || ||||| || || || || || Sbjct 76242 TTGCTGAACGTGAGTCCGGGCATGATGCCGCGTGACTTGAGCCAGAAGATTGAGGCGAAG 76301 Query 50065 GACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTG 50124 || ||||| || || || ||||| |||||||||| | || || || || | Sbjct 76302 CTACCGCTGAAGAAAATCCCCTCAACTGCCGCAAAGGCAATGACCCTTTCGCCGAAATTT 76361 Query 50125 GC------GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 50178 || |||| || ||||||| | ||||||||||||||||| || ||||| ||| Sbjct 76362 GCTTCCTGGCTGGCA---ATCCACTGGAGTGCCCAATCGGCCTTCTTCTTCACACACGGC 76418 Query 50179 ATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCG 50238 | ||| || |||||||| ||||| ||| || || | ||| | || ||||| Sbjct 76419 AGCGTCTCGATGGCATTGAAGAGGAAGTCCTTCTCCTGCGGATCCCGTATGTACGTATCA 76478 Query 50239 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAA 50298 || | | ||| |||||||| ||| | || || ||||| ||||| || || ||||| Sbjct 76479 ATGAGCAAACTGTACATTTCGCTATGTACATTCTCCATGGCAATCTGGAAGCCATAGAAG 76538 Query 50299 CATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACT 50358 ||| ||||| || || ||||| || || || || || | | ||| ||||| || Sbjct 76539 AATCGTGCCTCTGTGATTTGCACCTCCTGACTGAAGCGCTCCACGAGATTCTCATTTACA 76598 Query 50359 ATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGT 50418 || || || || ||||| || |||| || || | || || | ||||| Sbjct 76599 ATCCCATCGGATGCCGCAAAGAATGCCAGGACGTGGCTAATGAATTTCCTTTCGCAATCC 76658 Query 50419 GTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAAT 50478 | | |||||| | || ||||| |||| |||||||| || |||||||||||| Sbjct 76659 TTCAAAGCATTCCAGTGATCCATATCCCGGGATAGGTCTACTTCCTCAACTGTCCAAAAT 76718 Query 50479 GATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACA 50538 || ||||| |||||||| ||||| | ||| | || || ||||| || ||||| | |||| Sbjct 76719 GAGGCCTCGGCCTTTTTGTACATCTCCCACACATCGTGGTATTGAATGGGGAAGACAACA 76778 Query 50539 AATC 50542 |||| Sbjct 76779 AATC 76782 Score = 93.3 bits (102), Expect = 6e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 50427 ATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTC 50486 |||||| | || ||||| |||| |||||||| || |||||||||||||| ||||| Sbjct 78676 ATTCCAGTGATCCATATCCCGGGATAGGTCTACTTCCTCAACTGTCCAAAATGAGGCCTC 78735 Query 50487 TGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATC 50542 |||||||| ||||| | ||| | || || ||||| || ||||| | |||||||| Sbjct 78736 GGCCTTTTTGTACATCTCCCACACATCGTGGTATTGAATGGGGAAGACAACAAATC 78791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718165261552480