Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq79 120 3e-22 >seq79 Length=216850 Score = 120 bits (132), Expect = 3e-22 Identities = 396/610 (65%), Gaps = 12/610 (2%) Strand=Plus/Plus Query 13854 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 13913 || || || || |||| ||||||||| ||||| || ||||||||||| | ||| || Sbjct 76179 AGGTGCTTGAACATTAGACACGCAAAGTCACAGTGGAGGCCCTCATCGCGTGAAATGAGC 76238 Query 13914 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCA 13973 || || || || | ||| ||||| | || ||| || | ||| || |||| || Sbjct 76239 TCATTGCTGAACGTGAGTCCGGGCATGATGCCGCGTGACTTGAGCCAGAAGATTGAGGCG 76298 Query 13974 AATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAAC 14033 || ||| ||||| || ||||||||||| ||||| || || | | ||| || || Sbjct 76299 AAGCTACCGCTGAAGAAAATCCCCTCAACTGCCGCAAAGGCAATGACCCTTTCGCCGAAA 76358 Query 14034 GATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCC 14093 ||||| | | | | ||||| | ||||| || | || || || | | | | Sbjct 76359 TTTGCTTCCTGGCTGGCAATCCACTGGAGTGCCCAATCGGCCTTCTTCTTCACACACGGC 76418 Query 14094 ATTGTTTCAATAGCATTAAATAAATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCA 14153 | || || || ||||| || | | |||||||| | | | ||||| |||||| Sbjct 76419 AGCGTCTCGATGGCATTGAAGAGGAAGTCCTTCTCCTGCGGATCCCGTATGTACGTATCA 76478 Query 14154 ATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAG 14213 || || || || |||||||| |||| || ||||| || ||||| || ||||| ||| Sbjct 76479 ATGAGCAAACTGTACATTTCGCTATGTACATTCTCCATGGCAATCTGGAAGCCATAGAAG 76538 Query 14214 CATCTAGCTTCCGACCATTGTACTTCC-GAGTAAAATCTTTCGGCCAAATTTTCATTAAC 14272 ||| || || | ||| || ||| || | || | || | | ||| ||||| || Sbjct 76539 AATCGTGCCTCTGTGATTTGCACCTCCTGACT-GAAGCGCTCCACGAGATTCTCATTTAC 76597 Query 14273 TATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTC--- 14329 || ||||| || ||||| ||||||| | || |||| | ||| | ||| Sbjct 76598 AATCCCATCGGATGCCGCAAAGAATGCCAGGACGTGGCTAAT---GAATTTCCTTTCGCA 76654 Query 14330 ATTGTTGAGTTTTTTCCAATCGGAT--AAATCCTTAGAAAGATCTACTTCATCAACTGTC 14387 || || | ||||| | ||| | |||| || || |||||||| ||||||||| Sbjct 76655 ATCCTTCAAAGCATTCCAGT--GATCCATATCCCGGGATAGGTCTACTTCCTCAACTGTC 76712 Query 14388 CAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAA 14447 ||||| || | || ||||| ||||| |||| | || | ||| || || || Sbjct 76713 CAAAATGAGGCCTCGGCCTTTTTGTACATCTCCCACACATCGTGGTATTGAATGGGGAAG 76772 Query 14448 ACTACAAATC 14457 || ||||||| Sbjct 76773 ACAACAAATC 76782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479658847208800