Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq79 131 2e-25 >seq79 Length=216850 Score = 131 bits (144), Expect = 2e-25 Identities = 396/608 (65%), Gaps = 8/608 (1%) Strand=Plus/Plus Query 13642 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 13701 || || || || |||| ||||||||| ||||| || ||||||||||| | ||| || Sbjct 76179 AGGTGCTTGAACATTAGACACGCAAAGTCACAGTGGAGGCCCTCATCGCGTGAAATGAGC 76238 Query 13702 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCG 13761 || || || || | ||| ||||| | || ||| || | ||| || |||| ||| Sbjct 76239 TCATTGCTGAACGTGAGTCCGGGCATGATGCCGCGTGACTTGAGCCAGAAGATTGAGGCG 76298 Query 13762 AATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAAC 13821 || ||| ||||| || ||||||||||| ||||| || || | | ||| || || Sbjct 76299 AAGCTACCGCTGAAGAAAATCCCCTCAACTGCCGCAAAGGCAATGACCCTTTCGCCGAAA 76358 Query 13822 GATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCC 13881 ||||| | | | | ||||| | ||||| || | || || || | | | | Sbjct 76359 TTTGCTTCCTGGCTGGCAATCCACTGGAGTGCCCAATCGGCCTTCTTCTTCACACACGGC 76418 Query 13882 ATTGTTTCGATTGCATTGAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCA 13941 | || ||||| |||||||| | |||||||| | | | ||||| |||||| Sbjct 76419 AGCGTCTCGATGGCATTGAAGAGGAAGTCCTTCTCCTGCGGATCCCGTATGTACGTATCA 76478 Query 13942 ATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAA 14001 || || || || |||||||| |||| || || || || ||||| || ||||| || Sbjct 76479 ATGAGCAAACTGTACATTTCGCTATGTACATTCTCCATGGCAATCTGGAAGCCATAGAAG 76538 Query 14002 CATCTAGCTTCTGACCATTGTACCTCC-GAGTAAAATCTTTCTGCCAAGTTTTCATTAAC 14060 ||| || |||| ||| |||||| || | || | || | | || ||||| || Sbjct 76539 AATCGTGCCTCTGTGATTTGCACCTCCTGACT-GAAGCGCTCCACGAGATTCTCATTTAC 76597 Query 14061 AATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTC--- 14117 ||| ||||| || ||||| ||||||| | || |||| | ||| | ||| Sbjct 76598 AATCCCATCGGATGCCGCAAAGAATGCCAGGACGTGGCTAAT---GAATTTCCTTTCGCA 76654 Query 14118 ATTGTTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCA 14177 || || | ||||| | | | |||| || || |||||||| ||||||||||| Sbjct 76655 ATCCTTCAAAGCATTCCAGTGATCCATATCCCGGGATAGGTCTACTTCCTCAACTGTCCA 76714 Query 14178 AAAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAAC 14237 ||| || | || ||||| ||||| |||| | || | ||| || || || || Sbjct 76715 AAATGAGGCCTCGGCCTTTTTGTACATCTCCCACACATCGTGGTATTGAATGGGGAAGAC 76774 Query 14238 TACAAATC 14245 ||||||| Sbjct 76775 AACAAATC 76782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478519811424480