Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq743 221 2e-52 seq79 196 7e-45 seq1371 129 9e-25 seq2439 98.7 1e-15 >seq743 Length=41943 Score = 221 bits (244), Expect = 2e-52 Identities = 628/960 (65%), Gaps = 70/960 (7%) Strand=Plus/Plus Query 126677 CACGATCAATGTAGTCTACGATGCGTTCAATGTCACACTCTTTGACACCACGGGTCGTCA 126736 ||||||||||| |||| || | || || |||||| ||| || || || || || | Sbjct 26275 CACGATCAATGAAGTCCACCACACGATCCATGTCAGCCTCCACGAGCCCCCGAGTGGTGA 26334 Query 126737 CCGCAGGAGTACCGAGTCTGATGCCGCTTGGTCTGAGAGCGCTCTTGTCTCCGGGTACTG 126796 || || ||||| || | || ||| ||| ||||||| || || || ||||| | Sbjct 26335 GAGCGGGCGTACCAAGACGAATTCCGGATGGGTTGAGAGCAGATTTATCGCCAGGTACGG 26394 Query 126797 TGTTTTTGTTGCAAGCGATTCTGCACAGT--TCGAGGATGCGCTCTGCCGGTGCTCCTGC 126854 ||||||||||||| || ||| | | | || || | | ||||||| || || | Sbjct 26395 TGTTTTTGTTGCATGCAATT--GAAATTTCCTCCAGAAGGTACTCTGCCTTAGCCCCCGT 26452 Query 126855 GAGTCCCACACTGCGCAAATCCACTAGAATCAGATGCACATCGGTACCGCCAGTGGTGAC 126914 |||||||||| |||||||||||| || | ||||||||||| || || || |||| || Sbjct 26453 GAGTCCCACATTGCGCAAATCCATCAGCAGGAGATGCACATCAGTGCCCCCGGTGGCGAT 26512 Query 126915 GGTGTAGCCTCGTGAAACGAGTCCCTCTGC-CAACAACTGTGCATTTCGCACCACTCGTC 126973 || ||||||||| || | ||||| ||| || ||| |||||| | ||| | Sbjct 26513 GGAGTAGCCTCGCTCAATCAATCCCT-TGCACAGGCGCTGGGCATTTGTAATCACCTGCT 26571 Query 126974 TTTGGTAGAGTGCAAACTCTAGAGTGGTGGCCTGGTGCATTGCGGTGGCGATCGCTGCAA 127033 ||||||| |||| || ||| | |||||| | | || ||||| || || |||| Sbjct 26572 TTTGGTATTCGACAAATTCCGGAGATTTAGCCTGGAGGAATGTTGTGGCAATGGCAGCAA 26631 Query 127034 TCGTGTGATTGTGCGGTCCACCTTGCAGGCCAGGAAACACGGCTCGTTCAATTTCCTG-C 127092 | | |||||||| |||||||| || || || || || || ||| | | | ||| || | Sbjct 26632 TGGCATGATTGTGGGGTCCACCCTGAAGCCCCGGGAAGACAGCTTGATTGA-TTCGTGCC 26690 Query 127093 TCTA-----------------------------GTGA-------------TTTGCGGTAA 127110 |||| ||| || ||| | Sbjct 26691 TCTAAATCATACATAACTTTATCCCCATTCGCCTTGACGCTTCGTACACCCTTCCGGAAG 26750 Query 127111 AAGATGACTCCGGCTCGAGGACCTCTGAGAGTCTTGTGCGTTGTAGTGGTCACAATGTCA 127170 ||||| || || || | || || | ||| || || ||||| || ||| | || | ||| Sbjct 26751 AAGATTACCCCCGCCCTGGGTCCCCGGAGTGTTTTATGCGTCGTCGTGCTGACCACGTCG 26810 Query 127171 CAATACTCAAAGGGGCCAGGAAT-GACTTTGCCCGCAATCAAG-CCCGCAATGTGTGCAA 127228 || ||||||||||| | ||||| || || || | || |||| || ||| || | Sbjct 26811 CAGTACTCAAAGGGACTGGGAATCTGCTCTGTTACCA--CGAGCCCCGAAACGTGCGCCA 26868 Query 127229 TATCGGC-CATCAGCAAGGAGCCGGCTGCATCGGCAATCTCTCGGAATCGTCTATAGTCC 127287 | || || || || || | || | || |||||||| ||||| ||| | |||||| Sbjct 26869 TGTCCGCAAATAAGTAA-GCCCCATTTTGATTTGCAATCTCCCGGAAACGTTTGTAGTCC 26927 Query 127288 AAGCGCCGAGGATAGCAACTGGTGCCGGCTATGATTAGCCTAGGTTTGAATAGATTGGCA 127347 | || || | ||||| | || || ||||| | | | || ||||| ||| ||| Sbjct 26928 AGGCAGCGTGAGTAGCACGACATACCCGCAATGATGACCTTTGGCTTGAAGAGACGTGCA 26987 Query 127348 CTCTCGGCAAGTTTGGCATAGTCGACGAGTCCAGTC-TGAGGATCCACCTTGTACGGCAT 127406 |||| | || || | ||||||| ||| || ||| ||| | ||||||||||||||||| Sbjct 26988 TTCTCCTCGAGCTTATCGTAGTCGATGAGCCCCGTCTTGACG-TCCACCTTGTACGGCAT 27046 Query 127407 GCTTTCGAAAAAGAGTGATGTAGCGGACA-------CGTTGC-----GGAATCCGTGCGT 127454 || ||||| |||| || || || || | |||||| ||| || ||||| Sbjct 27047 ACTCTCGAAGAAGATGGAAGTTGCAGAGATTTTCTTCGTTGCCGTCATGAAGCCATGCGT 27106 Query 127455 CAGGTGGCCTCCGTCGGGCAGATCGAGTCCCATGATTCTACCGTGCGGTTTAACGATTCC 127514 |||||| || ||||| || ||||| || ||||| || | | | || || ||| | ||| Sbjct 27107 CAGGTGCCCCCCGTCCGGGAGATCCAGCCCCATAATACGATCATGGGGGTTACACAGTCC 27166 Query 127515 AGTGTACACGGCAAAGTTGGCCATCGAGCCCGAGTACGGTTGTACACACACTCCCCATTC 127574 ||||| ||||| || |||||| || ||||| || || || ||| ||| ||||| || Sbjct 27167 CGTGTAGACGGCCAAATTGGCCGGAGAACCCGAATAGGGCTGCACATTCACCCCCCACTC 27226 >seq79 Length=216850 Score = 196 bits (216), Expect = 7e-45 Identities = 489/742 (66%), Gaps = 22/742 (3%) Strand=Plus/Minus Query 125022 TGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCC 125081 ||||| |||||||||||||| ||||||| |||||||| || || || || || || ||| Sbjct 76747 TGGGAGATGTACAAAAAGGCCGAGGCCTCATTTTGGACAGTTGAGGAAGTAGACCTATCC 76688 Query 125082 AAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCAC 125141 ||| || | | ||| | || |||| || || | | || || ||| Sbjct 76687 CGGGATATGGATCACTGGAATGCT---TTGAAGGATTGCGAAAGGAAATTCATTAGCCAC 76631 Query 125142 ATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGATTC 125201 | |||| |||||||| | |||||||| || || || || ||||| || || ||| Sbjct 76630 GTCCTGGCATTCTTTGCGGCATCCGATGGGATTGTAAATGAGAATCTCGTGGAGCGCTTC 76571 Query 125202 TCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAG 125261 ||| ||| || || |||||| | ||| || || ||||| || || ||| Sbjct 76570 AGTCAGGAGGTGCAAATCACAGAGGCACGATTCTTCTATGGCTTCCAGATTGCCATGGAG 76511 Query 125262 AACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCGCAACGT 125321 || || || ||||||||| | || ||||| | |||||| || |||||||| Sbjct 76510 AATGTACATAGCGAAATGTACAGTTTGCTCATTGATACGTACATACGGGATCCGCAGGAG 76451 Query 125322 AAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGG 125381 || || | ||||| || || ||||| ||| |||||| | | || ||||| | ||| Sbjct 76450 AAGGACTTCCTCTTCAATGCCATCGAGACGCTGCCGTGTGTGAAGAAGAAGGCCGATTGG 76391 Query 125382 GTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCC 125441 | | | |||||| | | | | | | || ||| || | | || || || Sbjct 76390 GCACTCCAGTGGATTGCCAGCCAGGAAGCAAATTTCGGCGAAAGGGTCATTGCCTTTGCG 76331 Query 125442 GCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGC 125501 || || ||||| || ||||| ||||| || || | ||||| ||||||||| ||| Sbjct 76330 GCAGTTGAGGGGATTTTCTTCAGCGGTAGCTTCGCCTCAATCTTCTGGCTCAAGTCACGC 76271 Query 125502 GGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACAC 125561 || ||||||||||||| ||| ||| || ||| | || || || || |||||||| ||| Sbjct 76270 GGCATCATGCCCGGACTCACGTTCAGCAATGAGCTCATTTCACGCGATGAGGGCCTCCAC 76211 Query 125562 TGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGATCCAGCGAT 125621 ||||||||||| |||| |||| ||| | || ||||||| ||| | Sbjct 76210 TGTGACTTTGCGTGTCTAATGTT---CAA--------GCACCTCGTGCAGA---AGCCCT 76165 Query 125622 GAAAAG-----GTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTAA 125676 ||| | ||||| | || | ||| || |||| || || || || || || | Sbjct 76164 CAAAGGAGCGCATCATCGAAATCATTCGCGAAGCTGTGACCATTGAGCAGGAATTCCTCA 76105 Query 125677 CCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAG 125736 | || |||| || || |||| | |||||||| ||| | || |||| ||||||| | Sbjct 76104 CAGATGCCCTTCCTGTTGACATGCTGGGCATGAATTGCCAACTCATGTCGCAGTACATTG 76045 Query 125737 AGTTTGTGGCAGATCGTCTACT 125758 | || |||||||||||||| || Sbjct 76044 AATTCGTGGCAGATCGTCTTCT 76023 >seq1371 Length=16595 Score = 129 bits (142), Expect = 9e-25 Identities = 361/541 (67%), Gaps = 11/541 (2%) Strand=Plus/Minus Query 69938 GAGGAGCTCTTGTGGATGATTTCCGGATCGACCAATGCCAAAGAGCTG-AGCCGAAAGGG 69996 |||||||| | ||| | || ||| || || |||| |||||| ||| ||| ||| Sbjct 9173 GAGGAGCTTATTTGGTTCATACGCGGCTCTACGGATGCACGAGAGCTACAGCAGAA-GGG 9115 Query 69997 TGTACACATTTGGAGCGGCAACAGTAGTCGAAGCGTTT-TGGATTCGCTCGGCTTCACCG 70055 | | |||||||| || ||||||| || | || | ||||| | | ||||||| | Sbjct 9114 TATCACCATTTGGAATGGTAACAGTACCCGG-GAGTATCTGGATGAGATGGGCTTCAAGG 9056 Query 70056 ACAGACAAGAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCA 70115 | | ||||||| ||||||||||| || || |||||||| ||| | |||| || || Sbjct 9055 ATCGCGAAGAGGGTGATCTGGGGCCTGTTTATGGATTCCAATGGCGTCACTTTGGTGCCC 8996 Query 70116 AGTAT-GTAGACTGCGAGACAGACTATTCGGGTCAGGGTGTTGATCAATTGCAGACAATC 70174 || ||| | || || | || || ||||| || |||||| | ||| | Sbjct 8995 CCTACCGTACATGTCGTGATACG-TACGACGGCCAGGG-GTGGATCAACTTCAGGAGGTG 8938 Query 70175 ATTGACACTCTCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCT 70234 || | | || || || || ||| | | ||| | ||| | ||||||||||| Sbjct 8937 ATAAAGCTTATCCGCGAGAAGCCCACTGATCGTCGAATCATTATGAGTGCATGGAATCCT 8878 Query 70235 GCAGATTTGCACCAAATGGCACTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTAC 70294 | ||| | | | |||||| || ||||| |||||||| | | || || ||| | | Sbjct 8877 GTGGATCTCCCCATAATGGCGCTCCCACCCTGTCACTGCCTTGTACAATTCTACGTGGCC 8818 Query 70295 GATGGCAAATTGTCATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCC 70354 |||| | | || ||| ||||||||| | ||||||||||| || || ||||| Sbjct 8817 AATGGAGAGCTCTCGTGCCAAATGTATCAACGTTCAGCCGACATGGGACTGGGGGTACCA 8758 Query 70355 TTTAACATTGCAAGCTATTCTATGTTGACGCACATGATTGCTCACATTACCGGCCTGAAA 70414 || |||||||| |||||| || | | || | |||||||| || || || | || || Sbjct 8757 TTCAACATTGCCAGCTATGCTCTCCTCACACGAATGATTGCCCAAATCACAGATCT-CAA 8699 Query 70415 GCGCACGAG--TTCGTACACACCATTGGCGACGCTCACGTGTATTTAAATCACATCGAGC 70472 || || ||| ||||| |||||| | || || ||||| || || || |||||| | || | Sbjct 8698 GC-CAGGAGACTTCGTGCACACCCTCGGTGATGCTCATGTCTACTTGAATCACGTAGAAC 8640 Query 70473 C 70473 | Sbjct 8639 C 8639 >seq2439 Length=24097 Score = 98.7 bits (108), Expect = 1e-15 Identities = 250/378 (66%), Gaps = 8/378 (2%) Strand=Plus/Plus Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926 |||||| || || || ||||| || ||||| || | || | ||| | ||||| ||| Sbjct 2585 TACGTTGATCAAGGTGGGAATAAGCGCCCAGGTGCCTTTGCAATATACCTTGAACCCTGG 2644 Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986 || | ||| | ||||| || | || | || || | || ||| |||||||| Sbjct 2645 CATGGGGATATCTTTGAATTCCTAGACCTTAAAAAGAATACCGGTAAGGAAAAGGCACGA 2704 Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGAC 97046 || | || | || ||||| |||||| | || ||||| || ||| |||| ||| ||| Sbjct 2705 GCACGAGATCTCTTCTATGCGCTCTGGATTCCTGATTTATTTATGCAGCGTGTCTCCGAG 2764 Query 97047 GGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGC 97106 | ||| | ||||| || |||||||| || || || || ||| ||||||||||| Sbjct 2765 GATGGTGAATGGAGTCTCATGTGCCCTAACAAGTGCCCTGGATTGTTTGATTGCTGGGGT 2824 Query 97107 GAAGAGTTTGAGGCCAAGTACACGGCCTACG-AGCAAGAGGGCCG---ATACGTGAGACG 97162 ||||| ||| | |||||| |||| |||| ||| | | || ||| || Sbjct 2825 GAAGAATTTAATAAATTGTACACAAAGTACGAAGCAGAAGGTCAGTACATTCGTAAG--- 2881 Query 97163 AGTCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCC 97222 || || ||||| || ||| |||||| | ||| ||||| || ||||| || Sbjct 2882 -GTACCAGCTCGAGATCTTTGGTTTGCCATCATTCAAAGTCAAGTAGAAACGGGAACGCC 2940 Query 97223 GTACATTCTCTACAAGGA 97240 ||| || || |||||||| Sbjct 2941 GTATATGCTGTACAAGGA 2958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740952376316320