Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq1371 102 6e-17 >seq1371 Length=16595 Score = 102 bits (112), Expect = 6e-17 Identities = 142/198 (72%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 25425 AGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCTCCCAGAGTGTGGACAAACTCTCCC 25484 || ||||||||||||| || |||||| ||||| || || || ||||| || || ||||| Sbjct 8636 AGGGGTTCTACGTGATTCAAGTAGACATGAGCATCACCGAGGGTGTGCACGAAGTCTCCT 8695 Query 25485 GGTTCTAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTA 25544 || | || | || | | || ||||| ||||||||| |||||||| ||||| Sbjct 8696 GGCTTGAGATCTGTGATTTGGGCAATCATTCGTGTGAGGAGAGCATAGCTGGCAATGTTG 8755 Query 25545 AAGGGTACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTC 25604 || |||||||| | ||||||| | | || | || || | || |||||||||||| | Sbjct 8756 AATGGTACCCCCAGTCCCATGT-CGGCTGAACGTTGATACATTTGGCACGAGAGCTCTCC 8814 Query 25605 GTCGCTCACGTAAAACTG 25622 | | |||||| || || Sbjct 8815 ATTGGCCACGTAGAATTG 8832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340089794935836