Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq1178 113 2e-20 seq7024 111 8e-20 seq9096 109 3e-19 seq527 109 3e-19 seq28 109 3e-19 >seq1178 Length=27308 Score = 113 bits (124), Expect = 2e-20 Identities = 79/90 (88%), Gaps = 3/90 (3%) Strand=Plus/Plus Query 11443 TAAAAAATCAAAT---TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499 ||||||| |||| ||||||||| |||||||||| |||||||||||||||||||| Sbjct 23489 TAAAAAAACAAAAGTGTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCA 23548 Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||| |||||||||||||||||||| Sbjct 23549 CGACGCTCTAACCAACTGAGCTAATGGGCC 23578 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 15933 TGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 15992 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 15993 TGAGCTAATGGGCC 16006 >seq7024 Length=4652 Score = 111 bits (122), Expect = 8e-20 Identities = 79/91 (87%), Gaps = 4/91 (4%) Strand=Plus/Minus Query 11443 TAAAAAATCAAAT----TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 ||||||| |||| ||||||||| |||||||||| ||||||||||||||||||| Sbjct 1150 TAAAAAAACAAAAAGTGTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGC 1091 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||| |||||||||||||||||||| Sbjct 1090 ACGACGCTCTAACCAACTGAGCTAATGGGCC 1060 >seq9096 Length=1004 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 443 TGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 384 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 383 TGAGCTAATGGGCC 370 >seq527 Length=52690 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 21438 TGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 21379 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 21378 TGAGCTAATGGGCC 21365 >seq28 Length=380511 Score = 109 bits (120), Expect = 3e-19 Identities = 77/88 (88%), Gaps = 3/88 (3%) Strand=Plus/Plus Query 11445 AAAAATCAAAT---TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501 |||||| ||| ||||||||| |||||||||| |||||||||||||||||||||| Sbjct 296679 AAAAATAAAAAGGATGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACG 296738 Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||| |||||||||||||||||||| Sbjct 296739 ACGCTCTAACCAACTGAGCTAATGGGCC 296766 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261454448392432