Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq2439 410 2e-109 seq79 214 2e-50 >seq2439 Length=24097 Score = 410 bits (454), Expect = 2e-109 Identities = 1413/2173 (65%), Gaps = 74/2173 (3%) Strand=Plus/Minus Query 61986 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 62045 || |||| || ||||| |||| | || || ||||| || || | ||| ||||| ||| Sbjct 3993 TTATCCACAGTAAATTGGATGGCATTGGCAGCTGGTTTAGTGCGCAAATAATACATCCCC 3934 Query 62046 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGA 62105 ||||| || || | |||| | | ||||| || || ||||| ||| | || Sbjct 3933 GTTTTGAGGCCCATTTTCCAGGCATGGAAATGAATTGAAGTGAGTTTCCCATAGTTAGGT 3874 Query 62106 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 62165 ||||| | | || || | |||||||||||||| |||||||| || | ||| || ||| Sbjct 3873 TCTGCCACGTAAATGTTGAATGATTGACTTTGATCAATGAAGGCCCCACGGTCAGCTGCC 3814 Query 62166 ATTTTTATGATCGTCTT----TTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAA 62220 |||| || || || || ||| |||||||| | |||||||| ||||| | || Sbjct 3813 ATTTCAATCATTGTTTTCACCTTG----ATTTCCCACACGGTTTTATACAACTCACG-AA 3759 Query 62221 TATCTTCTGGAAGGTTTG-----TATTCTGAATGGATCCACCATCTGCCATAATCCTATT 62275 |||| || |||| ||| ||||||| | || ||| | || || | | || Sbjct 3758 TATCCTCAGGAA--TTTCCAGAATATTCTGCACAGAGCCATTGTTGGCAATTAATTTGTT 3701 Query 62276 CTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAAC 62335 ||| || ||||||||||| | | || | | | | | | ||||| ||||| Sbjct 3700 CTTCATTTCATCATTCCAAAGGCGTAGTTCAGAGAGATCCTTTAACAGATGGCTGTTAAC 3641 Query 62336 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 62395 ||||| ||||| ||||| | || | || ||||| ||||| || || ||||| | Sbjct 3640 CACTTGGAATTCCCCAGAAAGAACACGACGGGTGTACATATTGGATGTGTAGGGTTCGAA 3581 Query 62396 CGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62455 || |||||||| || | ||||||||| || || || || ||||| || ||||| | | Sbjct 3580 GGATTCATTATTGCCAAGAATTTGAGCCGTAGAAGCCGTTGGCATTGGAGCCACAAGCAG 3521 Query 62456 ACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGA 62513 ||||| || ||| ||| | | || || | || | ||||||||||||||| Sbjct 3520 GGAATTTCGAACACC--ATGCTGAGCAATCTTTGCCTTCAATTCATCCCAATTCCAAAGA 3463 Query 62514 TCCGACGG--TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTT----ACTGGCGTAC 62567 |||| || | | | || ||||| || || ||||| | | Sbjct 3462 TCCGTTGGCTTTCTATTCCACATATCGTAC--TGCAGAATTCCCTTGCTTACTGGACTTC 3405 Query 62568 GATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 62627 || ||| || || |||||||| ||||||||| || |||||||| ||||| | Sbjct 3404 CATTGTAC----GTCTCATATGGTCCGAGCTTCTCAGCGAGCTCACAACTAGCCTCAAGA 3349 Query 62628 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAG-ATCTTGTGCTTCCAGGCTATC 62686 || || || ||||||||||| ||||| | | || || ||||| ||||| |||||| Sbjct 3348 GCTCCATAGTAAATGGTTTCAAAGATTTGTTGGTTGAGTTTCTTG-GCTTCTTTGCTATC 3290 Query 62687 AAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGG 62746 | |||| | |||||| | || ||||||| |||||||| ||||| || || || Sbjct 3289 ATATGGGAGGCGCATGAGAATGTAAGCATCCGCTAGACCTTGAACTCCAATTCCAATCGG 3230 Query 62747 TCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAAT 62806 ||| |||| | |||| ||| | ||||| || | || || || || || ||||||| Sbjct 3229 TCTGTGTCGCATATTGGAGCGCTTTGCTTCGGGTACGGGGTAGTAGTTGATGTCTATAAC 3170 Query 62807 TTTATTGAGATT---TCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA 62863 ||| |||||||| | ||||||| ||| | || ||| || || ||||||| | Sbjct 3169 TTTGTTGAGATTGCGTGTGACAAT--CTTCG-TGACGGACTTTAGCTTCTCAAAATCATA 3113 Query 62864 TCGCCCATC---TATTACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTAC 62920 | ||| | ||||||||| || | |||| ||||| | ||| || || || | Sbjct 3112 CGTCTTATCGGGCAGTACAAACATATTAAGTGCAATTGATGCTAAATTGCACACAGCAAT 3053 Query 62921 CTCAT--TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTT 62978 ||||| | | | || ||||| | ||||| ||||| || || ||||| || || Sbjct 3052 CTCATCCTTGGA--CGAATATTCAACGATCTCGGTGCAGAGGTTGCTACAGCGAATTGTA 2995 Query 62979 CCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTA 63038 || | ||| || ||||||||||| |||||| || ||||| || || || | || || Sbjct 2994 CCAATATTCTGCTGATTACTCTTACGGTTACATGCGTCCTTGTACAGCATATACGGCGTT 2935 Query 63039 CCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGAT 63098 || ||||| | ||| || || || || ||| | ||||||| || || Sbjct 2934 CCCGTTTCTACTTGACTTTGAATGATGGCAAACCAAAGATCTCGAGCTGGTACCTTACGA 2875 Query 63099 TTGTATCTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACA 63158 |||| | |||| |||||| ||| |||||| | || || || ||||| | Sbjct 2874 ATGTACTGACCTTCTGCTTCGTACTTTGTGTACAATTTATTAAATTCTTCACCCCAGCAA 2815 Query 63159 TTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACT 63218 | ||||||||| || | | || ||||| | ||| || || || || || Sbjct 2814 TCAAACAATCCAGGGCACTTGTTAGGGCACATGAGACTCCATTCACCATCCTCGGAGACA 2755 Query 63219 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTC 63277 || | |||||| | |||||||||||| || || ||| || ||||||| || || || | Sbjct 2754 CGCTGCATAAATAAATCAGGAATCCAGAGCGC-ATAGAAGAGATCTC--GTGCT-CGTGC 2699 Query 63278 C---TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 63334 | || || || |||||||||||||| || ||||| | | ||||| |||||| || Sbjct 2698 CTTTTCCTTACCGGTATTCTTTTTAAGGTCTAGGAATTCAAAGATATCCCCATGCCAGGG 2639 Query 63335 TTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 63394 ||| | |||||| || | | || || || || || || || ||||| | ||| | || Sbjct 2638 TTCAAGGTATATTGCAAAGGCACCTGGGCGCTTATTCCCACCTTGATCAACGTAGCAGGC 2579 Query 63395 GGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGA 63454 || | || || || | | ||| || | | || || ||| | |||||||| || | Sbjct 2578 AGTAGTGTTGTAGACGCGAAGCATCGGTACGAGTCCATTCGATGTGCCATTGGTTCCAGC 2519 Query 63455 GATATAGCTTCCACTGGCACGAATATTACTAATTGAT-AGACCTATTCCCCCTGCCATTT 63513 || | || |||| || ||||| | | | | | | ||| || || ||||| | Sbjct 2518 AATGTGACTACCACGAGCTCGAAT-GCAGTGAGTATTAACACCAATCCCTCCTGCAGACT 2460 Query 63514 TAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCA 63573 | ||||||| |||||| |||| | || || |||||||| || || || ||||| || Sbjct 2459 TTGAGATTAGAGCGCATTGTTTCAGTGTATCGTAGATACCATCAATACTGTCATCAGCCA 2400 Query 63574 TGTTAAGTAGAAAACAGCTAGACATTTGGTGACG-ACT--AGTTCCCGCATTAAATAAGG 63630 || || || ||||| |||| | | ||| | ||| ||| | || ||| | | Sbjct 2399 TGGACAGGAGGAAACA---AGACGATAGCTGAGGCACTGGAGTGGCAGCTGCAAAGAGTG 2343 Query 63631 TAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGT 63690 | || || |||||||| || | || || || || |||||||||||||| |||| Sbjct 2342 TTGGTGATGCGTGCGTGAAATACCGTTGTGATAGAAGGTTGTACGTCTCAATGGCTGCAG 2283 Query 63691 CTATATCCCATT--GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTC 63748 | || | |||| |||||||| || | || ||||| | ||| ||||| || ||||| Sbjct 2282 CAATGT--CATTCCCGTGAATTCCCACAGATACTCGCATCAGCATATGCTGGGGCCTTTC 2225 Query 63749 AACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATA 63808 | |||| || | || |||| || || ||| | || | || || || |||||||| Sbjct 2224 AGCGATTTTCCCGCCGATCTTCATTAAATATGATCTCTCGAGTGTCTTGAAGCCAAAATA 2165 Query 63809 GTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTT 63868 | |||| | |||| || || | | || |||| || || || || || | Sbjct 2164 GCTGTACCCATAGTCCCGATCATGCACGATGGCCGAATTAAGCTTCTCAGCATTCGCAAT 2105 Query 63869 AACTATATCCATGGTGATACT-TGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAA 63927 || || | | |||||| | ||||| | || || || || | | || Sbjct 2104 AATGATCT-TGTAGTGATATTCAGAAATTTTTGGTGACCACTTGCCGGTAGTCTCGTT-- 2048 Query 63928 CATAG--TTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAG 63985 ||| | || | | || ||| || ||| ||| | ||| || || ||||| || | Sbjct 2047 CATTGCCATGTACAGATTTGTCATAACCTCAGAAAACAATTTCTTCGTCTCCTTATGCAA 1988 Query 63986 ATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT 64045 ||| || || | | || ||| || | | ||||| |||| ||| | ||| || || Sbjct 1987 ATTAGAGACAACCAATCGGGCAGCCAAGACCGCATAGTCCGCATGATCTGTTGTCATGGT 1928 Query 64046 GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCC 64105 ||||| |||| ||||||| | |||||||||| ||| |||||||| ||| ||||| Sbjct 1927 AGCTGCAGTTTCTGCTGCCAAATTGTCCAATTCCGGCGTCGTTACTCCTGAATAAATTCC 1868 Query 64106 TTGAATAACCTTC 64118 | | |||||| Sbjct 1867 CTTTTTCACCTTC 1855 >seq79 Length=216850 Score = 214 bits (236), Expect = 2e-50 Identities = 410/604 (68%), Gaps = 9/604 (1%) Strand=Plus/Plus Query 33289 TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCG 33348 || || ||||| | ||| || || || ||||| || ||||| || | ||| || || Sbjct 76182 TGCTTGAACATTAGACACGCAAAGTCACAGTGGAGGCCCTCATCGCGTGAAATGAGCTCA 76241 Query 33349 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAAT 33408 ||| ||||||||||||||||| | ||| || || ||||| || || || ||||| Sbjct 76242 TTGCTGAACGTGAGTCCGGGCATGATGCCGCGTGACTTGAGCCAGAAGATTGAGGCGAAG 76301 Query 33409 GATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCG 33468 || ||||| || || || ||||| ||||||||||| | || || || || Sbjct 76302 CTACCGCTGAAGAAAATCCCCTCAACTGCCGCAAAGGCAATGACCCTTTCGCCGAAATTT 76361 Query 33469 GC------GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 33522 || |||| || ||||||| | ||||||||||||||||| || ||||| ||| Sbjct 76362 GCTTCCTGGCTGGCA---ATCCACTGGAGTGCCCAATCGGCCTTCTTCTTCACACACGGC 76418 Query 33523 ATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCG 33582 | ||| || |||||||| ||||| ||| || || | ||| | || ||||| Sbjct 76419 AGCGTCTCGATGGCATTGAAGAGGAAGTCCTTCTCCTGCGGATCCCGTATGTACGTATCA 76478 Query 33583 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAA 33642 || | | ||| |||||||| ||| | || || ||||| ||||| || || ||||| Sbjct 76479 ATGAGCAAACTGTACATTTCGCTATGTACATTCTCCATGGCAATCTGGAAGCCATAGAAG 76538 Query 33643 CATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACT 33702 ||| ||||| || || || || || || || || ||| | | ||| ||||| || Sbjct 76539 AATCGTGCCTCTGTGATTTGCACCTCCTGACTGAAGCGCTCCACGAGATTCTCATTTACA 76598 Query 33703 ATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGT 33762 || || || || ||||| || |||| || || | || || | ||||| Sbjct 76599 ATCCCATCGGATGCCGCAAAGAATGCCAGGACGTGGCTAATGAATTTCCTTTCGCAATCC 76658 Query 33763 GTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAAT 33822 | | |||||| | || ||||| |||| |||||||| || |||||||||||| Sbjct 76659 TTCAAAGCATTCCAGTGATCCATATCCCGGGATAGGTCTACTTCCTCAACTGTCCAAAAT 76718 Query 33823 GATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACA 33882 || ||||| |||||||| ||||| | ||| | || | ||||| || ||||| | |||| Sbjct 76719 GAGGCCTCGGCCTTTTTGTACATCTCCCACACATCGTGGTATTGAATGGGGAAGACAACA 76778 Query 33883 AATC 33886 |||| Sbjct 76779 AATC 76782 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 33771 ATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTC 33830 |||||| | || ||||| |||| |||||||| || |||||||||||||| ||||| Sbjct 78676 ATTCCAGTGATCCATATCCCGGGATAGGTCTACTTCCTCAACTGTCCAAAATGAGGCCTC 78735 Query 33831 TGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAATC 33886 |||||||| ||||| | ||| | || | ||||| || ||||| | |||||||| Sbjct 78736 GGCCTTTTTGTACATCTCCCACACATCGTGGTATTGAATGGGGAAGACAACAAATC 78791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622857402161120