Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq2439 138 1e-27 seq741 100 3e-16 seq1176 86.0 6e-12 >seq2439 Length=24097 Score = 138 bits (152), Expect = 1e-27 Identities = 508/780 (65%), Gaps = 23/780 (3%) Strand=Plus/Minus Query 147113 CACGGTGAATTGAATCGTGTTTGCTGCGGGTTTGGTTCTCAAATAGTACATGCCCGTTTT 147172 ||| || ||||| || | || || || ||||| || | |||||| ||||| |||||||| Sbjct 3988 CACAGTAAATTGGATGGCATTGGCAGCTGGTTTAGTGCGCAAATAATACATCCCCGTTTT 3929 Query 147173 TAAACCCTTTTCCCAAGAATAGTCGTGAATGGATGATAAAACTTT---ATAGGTTGGATT 147229 | ||| ||| ||| | || | ||||| || | | ||| |||| | || | Sbjct 3928 GAGGCCCATTTTCCAGGCATGGAAATGAATTGAAGTGAG---TTTCCCATAGTTAGGTTC 3872 Query 147230 GGCCACAAAAAGATTGAGCGATTGGCTCTGATCGATGTAAGGTCCC-CGCTCTGCGGCCA 147288 ||||| ||| |||| ||||| || ||||| ||| |||| ||| || || || |||| Sbjct 3871 TGCCACGTAAATGTTGAATGATTGACTTTGATCAATG-AAGGCCCCACGGTCAGCTGCCA 3813 Query 147289 TGTCCAACACTACTTTTTGTTTAATTTCCCAAGCGGTCTTGAAGAGCGCCTTGATATTGT 147348 | || | || | ||| || |||||||| |||| || | | | | |||| | Sbjct 3812 TTTCAATCATTGTTTTCACCTTGATTTCCCACACGGTTTTATACAACTCACGAATATCCT 3753 Query 147349 GTGGAATTTCATCAATATTTTGTACAGATCCGTTGTTTTTAATAATTTTTATCATGAT-- 147406 |||||||| |||||| || ||||| || ||||| ||| | ||| || | || Sbjct 3752 CAGGAATTTCCAGAATATTCTGCACAGAGCCATTGTTGGCAATTAATTTGTTCTTCATTT 3693 Query 147407 -ATCTGTCGAATATACGTTGGTGTCTACGAGTTTATCGACGAGATG-CTGATTGACCACT 147464 ||| || || | ||| | | | ||| | | | ||||| ||| || |||||| Sbjct 3692 CATCATTCCAA-AGGCGTAGTT--CAGAGAGATCCTTTAACAGATGGCTG-TTAACCACT 3637 Query 147465 TGATACTCGCCCGACAGAACTCTTCGTACGTACAAATTACTAGTAAACGGCTCGAACGAC 147524 || | || || || ||||| | || ||||| ||| || | || ||||| || Sbjct 3636 TGGAATTCCCCAGAAAGAACACGACGGGTGTACATATTGGATGTGTAGGGTTCGAAGGAT 3577 Query 147525 TCGTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATGTAAGCAATCAATAATGAA 147584 || || || || ||||| || || || | ||||| ||||| ||| | | | ||| Sbjct 3576 TCATTATTGCCAAGAATTTGAGCCGTAGAAGCCGTTGGCATTGGAGCCACAAGCAGGGAA 3517 Query 147585 TTGCGTAAGCCGTGCATAGCCATTTCTCGCTTAAGCTCGTCCCAGTTCCAAAGATCATTC 147644 || || | || ||| ||| || | | ||| | || ||||| ||||||||||| | Sbjct 3516 TTTCGAACACCATGCTGAGCAATCTTTGCCTTCAATTCATCCCAATTCCAAAGATC---C 3460 Query 147645 GATTGGTTAATATTCCACAAATCAAACTGTAAAAGTCCACAACTTGCAGGGCTTCCATCG 147704 | | | || ||||||||| ||| |||| | || ||| ||| | || ||||||| | Sbjct 3459 GTTGGCTTTCTATTCCACATATCGTACTGCAGAATTCCCTTGCTTACTGGACTTCCATTG 3400 Query 147705 TAAGAATCGTATGTTCCGTGCAGTTTAGCTAGTTCGATACTTTGACT-TAGTGCACCATA 147763 || | || |||| |||| || | ||| || || | | | | || || || ||||| Sbjct 3399 TACGTCTCATATGGTCCGAGCTTCTCAGCGAGCTC-ACAACTAGCCTCAAGAGCTCCATA 3341 Query 147764 ATAAATAGTTTCTGAAATCTTTTTATTTAAATCTC-TAGCCTCTTGGCTGTCGTAGGGCA 147822 ||||| ||||| | || || || || | | || | || |||| ||| || || || | Sbjct 3340 GTAAATGGTTTCAAAGAT-TTGTTGGTTGAGTTTCTTGGCTTCTTTGCTATCATATGGGA 3282 Query 147823 TATCCAAAATGGCGAACGTATCCGCAAGTCCTTGAATACCGATACCGATGGGTCGGTGTC 147882 || | | | | |||||| || ||||||| || || || || |||| ||||| Sbjct 3281 GGCGCATGAGAATGTAAGCATCCGCTAGACCTTGAACTCCAATTCCAATCGGTCTGTGTC 3222 >seq741 Length=40847 Score = 100 bits (110), Expect = 3e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 71672 ACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCT-ACGCAATGAGGGTAAAATTCA 71730 || || ||||| || ||||||||||| ||| |||| | | || | ||||| || || || Sbjct 35538 ACTCACGATGAGCTGTGGAATGCTGCACAGATACAGATGAAGC-AGGAGGGGAAGATGCA 35596 Query 71731 CGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGCA 71790 ||||| | | || ||||||||||| || ||||||||||||||||| | | |||||| | Sbjct 35597 CGGATTCATGCGGATGTACTGGGCAAAGAAGATTCTCGAGTGGACAAAGAGCCCCGAGGA 35656 Query 71791 GGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTAA 71850 || || | | | || || || || ||| | |||| |||| || | ||||| || Sbjct 35657 AGCCATCTCATTTGCAATCTACCTCAATGATCGCTACAACATCGATGGGAGGGATCCAAA 35716 Query 71851 CGGTTATGTCGG 71862 |||| ||| || Sbjct 35717 TGGTTTTGTGGG 35728 >seq1176 Length=25388 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| |||||| | || || || |||||||| |||| | || | Sbjct 17492 ATGCAGATCTTTGTGAAAACACTCACAGGGAAGACGATCACCCTCGAGGTTGAGCCGTCA 17433 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||||||| | || ||| || ||| ||||||||||| || || || ||||| Sbjct 17432 GATACCATCGAGAATGTAAAAGCTAAAATTCAGGACAAAGAAGGCATTCCGCCAGATCAG 17373 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | ||||| | || ||| || || || ||||||| | | | |||||| ||| Sbjct 17372 CAGCGTCTCATCTTCGCCGGGAAGCAGCTGGAAGATGGGCGTACATTGTCCGACTACAAC 17313 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || || ||||| || |||| || || || Sbjct 17312 ATCCAGAAGGAATCAACACTCCACCTTGTGCT 17281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478593400815040