Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2439 233 5e-56 seq1371 120 8e-22 seq334 86.0 2e-11 >seq2439 Length=24097 Score = 233 bits (258), Expect = 5e-56 Identities = 1091/1713 (64%), Gaps = 37/1713 (2%) Strand=Plus/Plus Query 363447 TGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGA 363506 |||| | || ||||||||| | ||||| || || | || || || | || ||| Sbjct 2224 TGAAAGGCCCCAGCATATGCTGATGCGAGTATCTGTGGGAATTCACGGGAATGACATTGC 2283 Query 363507 TGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATT-CACGCACGCCACGCCAA 363565 ||| || ||||| || || || |||||| || ||||| ||||||||| | |||| Sbjct 2284 TGCAGCCATTGAGACGTACAACCTTCTATCACAACG-GTATTTCACGCACGCATCACCAA 2342 Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGA 363625 || | | |||| |||| || ||| | || ||||| || || || ||| Sbjct 2343 CACTCTTTGCAGCTGCCACTCCAGTGCCTCAGCTATCGTCTTGTTTCCTCCTGTCCATGG 2402 Query 363626 AGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGA 363685 || || || || ||||||| || ||||| || | || ||||| || || ||| Sbjct 2403 CTGATGACAGTATTGATGGTATCTACGATACACTGAAACAATGCGCTCTAATCTCAAAGT 2462 Query 363686 ATGCAGGCGGAATTGGTGTATCGATCCACAATG--TTCGTGCACAGAACAGTTACATTCG 363743 |||||| || |||||||| || | || || |||| || | ||| ||||| Sbjct 2463 CTGCAGGAGGGATTGGTGTTA--ATACTCACTGCATTCGAGCTCGTGGTAGTCACATTGC 2520 Query 363744 CGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTG 363802 || || | || | | |||||||| || || || |||||||| || | ||| ||||| Sbjct 2521 TGGAACCAATGGCACA-TCGAATGGACTCGTACCGATGCTTCGCGTCTACAACACTACTG 2579 Query 363803 CGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGC 363862 | | ||||| || || ||||| |||||| ||| || ||||| || || || || | Sbjct 2580 CCTGCTACGTTGATCAAGGTGGGAATAAGCGCCCAGGTGCCTTTGCAATATACCTTGAAC 2639 Query 363863 CTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAAT 363922 | |||| ||||| ||||| || || || || || || || || || || | Sbjct 2640 CCTGGCATGGGGATATCTTTGAATTCCTAGACCTTAAAAAGAATACCGGTAAGGAAAAGG 2699 Query 363923 TGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTG- 363981 || ||||| ||||| |||||||| || ||| || |||| |||||| |||| || Sbjct 2700 CACGAGCACGAGATCTCTTCTATGCGCTCTGGATTCCTGATTTATTTATGCAGCGTGTCT 2759 Query 363982 --GAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATG 364039 |||| ||| |||| || ||| | ||||| || | || || || | | ||| Sbjct 2760 CCGAGGATGGT--GAAT-GGAGTCTCATGTGCCCTAACAAGTGCCCTGGATTGTTTGATT 2816 Query 364040 TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGC---TC 364096 |||||||| || | | | | ||| |||||| ||| | || || || || Sbjct 2817 GCTGGGGTGAAGAATTTAATAAATTGTACACAAAGTACGAAGCAGAAGGTCAGTACATTC 2876 Query 364097 GTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAG 364156 ||||| | || || | | || |||||||||||||| | || | || || | Sbjct 2877 GTAAGGTA---CCAGCTCGAGATCTTTGGTTTGCCATCATTCAAAGTCAAGTAGAAACGG 2933 Query 364157 GAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTG 364216 |||| || |||||| ||||||| || | || ||||| ||| || |||||| | ||| Sbjct 2934 GAACGCCGTATATGCTGTACAAGGACGCATGTAACCGTAAGAGTAATCAGCAGAATATTG 2993 Query 364217 GTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAG 364275 ||||||||| || | |||||||| || |||||||| ||||||| | | || ||| Sbjct 2994 GTACAATTC-GCTGTAGCAACCTCTGCACCGAGATCGTTGAATATTCGTCCAAGGATGAG 3052 Query 364276 ACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTA---AAAGATGGTACT 364332 | ||| || || || | || || || || ||| ||||||| ||| || Sbjct 3053 ATTGCTGTGTGCAATTTAGCATCAATTGCACTTAATATGTTTGTACTGCCCGATAAGACG 3112 Query 364333 TTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTT 364392 | ||| || | || | ||| || | || || |||||||| |||| ||| Sbjct 3113 TATGATTTTGAGAAGCTAAAGTCCGTCACGAAGATTGTCACACGCAATCTCAACAAAGTT 3172 Query 364393 ATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCG 364452 || |||| || || || || | || ||||| |||| || |||||||| || | ||| Sbjct 3173 ATAGACATCAACTACTACCCCGTACCCGAAGCAAAGCGCTCCAATATGCGACACAGACCG 3232 Query 364453 ATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTT---TTATGATGCTCAAGATGGCATTT 364509 ||||| |||| || || || || || || | || || | |||| | | ||| | Sbjct 3233 ATTGGAATTGGAGTTCAAGGTCTAGCGGATGCTTACATTCTCATGCGC---CTCCCATAT 3289 Query 364510 GATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCA 364569 ||| || || || || | | ||||||||||| || || | || || Sbjct 3290 GATAGCAAAGAAGCCAAGAAACTCAACCAACAAATCTTTGAAACCATTTACTATGGAGCT 3349 Query 364570 ATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGG--GT 364627 | ||| ||||| | || | | ||| || || || | || || Sbjct 3350 CTTGAGGCTAGTTGTGAGCTCGCTGAGAAGCTCGGACCATATGAGACGTACAATGGAAGT 3409 Query 364628 CCCCTCTTTCGC-AGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGA 364686 || | || |||||| | |||| ||| | |||||| | |||| | | | Sbjct 3410 CC---AGTAAGCAAGGGAATTCTGCAGTACGATATGTGGAATAGAAAGCCAACGGATCTT 3466 Query 364687 TGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTT 364746 ||||| |||||| | | || || |||||||| ||| || ||||| || Sbjct 3467 TGGAATTGGGATGAATTGAAGGCAAAGATTGCTCAGCATGGTGTTCGAAATTCCCTGCTT 3526 Query 364747 ACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAA 364806 || || ||||| ||||||||||| || || || || || || || || | ||||||| Sbjct 3527 GTGGCTCCAATGCCAACGGCTTCTACGGCTCAAATTCTTGGCAATAATGAATCCTTCGAA 3586 Query 364807 CCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAAT 364866 || | ||| |||| | || | || || |||||||| || ||||| | || ||||| Sbjct 3587 CCCTACACATCCAATATGTACACCCGTCGTGTTCTTTCTGGGGAATTCCAAGTGGTTAAC 3646 Query 364867 AAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTAT 364926 | | || | |||||||| || || | | || ||| ||| ||||||||| | Sbjct 3647 AGCCATCTGTTAAAGGATCTCTCTGAACTACGCCTTTGGAATGATGAAATGAAGAACAAA 3706 Query 364927 ATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCT 364986 | || ||| ||||| ||||||||||| |||| | | |||| || ||| | Sbjct 3707 TTAATTGCCAACAATGGCTCTGTGCAGAATATTCTGGAAATTCCTGAGGATATTCGTGAG 3766 Query 364987 ATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGC 365046 | || |||||||| |||||||| || ||| | ||||| ||||| || || || Sbjct 3767 TTGTATAAAACCGTGTGGGAAATCAAGGTGAAAACAATGATTGAAATGGCAGCTGACCGT 3826 Query 365047 GGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCC 365106 || || || || ||| || || || || ||| | | | || | | || | || | Sbjct 3827 GGGGCCTTCATTGATCAAAGTCAATCATTCAACATTTACGTGGCAGAACCTAACTATGGG 3886 Query 365107 AAGCTTACATCCATGCATTTCTACGGGTGGAAA 365139 || || || || || |||||| | | |||||| Sbjct 3887 AAACTCACTTCAATTCATTTCCATGCCTGGAAA 3919 >seq1371 Length=16595 Score = 120 bits (132), Expect = 8e-22 Identities = 272/400 (68%), Gaps = 7/400 (2%) Strand=Plus/Minus Query 111482 CGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTA 111541 |||||| |||||||| || || ||||| ||||| |||||||| ||||||||||| ||| Sbjct 9051 CGAAGAGGGTGATCTGGGGCCTGTTTATGGATTCCAATGGCGTCACTTTGGTGCCCCCTA 8992 Query 111542 CAAAACCATG-CACGACTCATATGATTCACAGGGAACTGATCAATTACAGAATGTCATTG 111600 | || ||| | || | || || ||||| |||||| | ||| | || || Sbjct 8991 CCGTAC-ATGTCGTGATACGTACGACGGCCAGGGGTG-GATCAACTTCAGGAGGTGATAA 8934 Query 111601 ATCAAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATG 111660 | | || | || || ||| |||||| || ||||||||||||||||| || || Sbjct 8933 AGCTTATCCGCGAGAAGCCCACTGATCGTCGAATCATTATGAGTGCATGGAATCCTG-TG 8875 Query 111661 CAT-TGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGC-CAGTTTTATGTACACGA 111718 || | | |||||| || ||||| ||||| || || || || || || | | Sbjct 8874 GATCTCCCCATAATGGCGCTCCCACCCTGTCA-CTGCCTTGTACAATTCTACGTGGCCAA 8816 Query 111719 CGGGATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTT 111778 || ||| || |||||||||||||| || || || || || || || || || || || Sbjct 8815 TGGAGAGCTCTCGTGCCAAATGTATCAACGTTCAGCCGACATGGGACTGGGGGTACCATT 8756 Query 111779 TAATATTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCATTTTACAAATCTCAAACC 111838 || ||||| || || || || || || | | || || || | ||| ||||||| || Sbjct 8755 CAACATTGCCAGCTATGCTCTCCTCACACGAATGATTGCCCAAATCACAGATCTCAAGCC 8696 Query 111839 GGGTGAATTCATTCACGTTATCGGAGATGCGCATGTTTAC 111878 || || ||| | ||| |||| ||||| ||||| ||| Sbjct 8695 AGGAGACTTCGTGCACACCCTCGGTGATGCTCATGTCTAC 8656 >seq334 Length=136801 Score = 86.0 bits (94), Expect = 2e-11 Identities = 108/145 (74%), Gaps = 4/145 (3%) Strand=Plus/Plus Query 371457 CCAATGGTCATGCGTGATGGGATGGCATGTGGATTGATGATAATATCGGGTGCAACTCCG 371516 ||||| ||||| || || ||||| || ||||||||||||||||||||||||| | || Sbjct 115138 CCAATTGTCATACGCGAGGGGATAGCGTGTGGATTGATGATAATATCGGGTGTTATGCCT 115197 Query 371517 TCGGCTGTGCATGGAAAGTCGGCTGCTGGC-ATAGTG-ACGCCACACACACCTTTTTGCC 371574 ||| ||| |||| | || || ||| | ||| || | |||||| ||||| |||| Sbjct 115198 TCGCACGTGAATGGCATATC--CTCCTGCCTATACTGAATCCCACACGTTCCTTTCTGCC 115255 Query 371575 CGTGCCTGGCCGAGAATTTGTCGCC 371599 ||||||| | | |||||| || || Sbjct 115256 CGTGCCTCGAGGCGAATTTATCCCC 115280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303161024618024