Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq2439 405 6e-108 seq79 210 3e-49 >seq2439 Length=24097 Score = 405 bits (448), Expect = 6e-108 Identities = 1225/1866 (66%), Gaps = 68/1866 (4%) Strand=Plus/Minus Query 61841 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 61900 || |||| || ||||| |||| | || || ||||| || || | ||| ||||| ||| Sbjct 3993 TTATCCACAGTAAATTGGATGGCATTGGCAGCTGGTTTAGTGCGCAAATAATACATCCCC 3934 Query 61901 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGA 61960 ||||| || || | |||| | | ||||| || || ||||| ||| | || Sbjct 3933 GTTTTGAGGCCCATTTTCCAGGCATGGAAATGAATTGAAGTGAGTTTCCCATAGTTAGGT 3874 Query 61961 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 62020 ||||| | | || || | |||||||||||||| |||||||| || | ||| || ||| Sbjct 3873 TCTGCCACGTAAATGTTGAATGATTGACTTTGATCAATGAAGGCCCCACGGTCAGCTGCC 3814 Query 62021 ATTTTTATAATCGTCTT----TTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAA 62075 |||| || || || || ||| |||||||| | |||||||| ||||| | || Sbjct 3813 ATTTCAATCATTGTTTTCACCTTG----ATTTCCCACACGGTTTTATACAACTCACG-AA 3759 Query 62076 TATCTTCTGGAAGGTTTG-----TATTCTGAATGGATCCACCATCTGCCATAATCCTATT 62130 |||| || |||| ||| ||||||| | || ||| | || || | | || Sbjct 3758 TATCCTCAGGAA--TTTCCAGAATATTCTGCACAGAGCCATTGTTGGCAATTAATTTGTT 3701 Query 62131 CTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAAC 62190 ||| || ||||||||||| | | || | | | | | | ||||| ||||| Sbjct 3700 CTTCATTTCATCATTCCAAAGGCGTAGTTCAGAGAGATCCTTTAACAGATGGCTGTTAAC 3641 Query 62191 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 62250 ||||| ||||| ||||| | || | || ||||| ||||| || || ||||| | Sbjct 3640 CACTTGGAATTCCCCAGAAAGAACACGACGGGTGTACATATTGGATGTGTAGGGTTCGAA 3581 Query 62251 AGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62310 || |||||||| || | ||||||||| || || || || ||||| || ||||| | | Sbjct 3580 GGATTCATTATTGCCAAGAATTTGAGCCGTAGAAGCCGTTGGCATTGGAGCCACAAGCAG 3521 Query 62311 ACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGA 62368 ||||| || ||| ||| | | || || | || | ||||||||||||||| Sbjct 3520 GGAATTTCGAACACC--ATGCTGAGCAATCTTTGCCTTCAATTCATCCCAATTCCAAAGA 3463 Query 62369 TCCGACGG--TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTT----ACTGGCGTAC 62422 |||| || | | | || ||||| || || ||||| | | Sbjct 3462 TCCGTTGGCTTTCTATTCCACATATCGTAC--TGCAGAATTCCCTTGCTTACTGGACTTC 3405 Query 62423 GATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 62482 || ||| || || |||||||| ||||||||| || |||||||| ||||| | Sbjct 3404 CATTGTAC----GTCTCATATGGTCCGAGCTTCTCAGCGAGCTCACAACTAGCCTCAAGA 3349 Query 62483 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAG-ATCTTGCGCTTCCAGGCTATC 62541 || || || ||||||||||| ||||| | | || || ||||| ||||| |||||| Sbjct 3348 GCTCCATAGTAAATGGTTTCAAAGATTTGTTGGTTGAGTTTCTTG-GCTTCTTTGCTATC 3290 Query 62542 AAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGG 62601 | |||| | |||||| | || || |||| |||||||| ||||| || || || Sbjct 3289 ATATGGGAGGCGCATGAGAATGTAAGCATCCGCTAGACCTTGAACTCCAATTCCAATCGG 3230 Query 62602 TCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAAT 62661 ||| |||| | |||| ||| | ||||| || | || || || || || ||||||| Sbjct 3229 TCTGTGTCGCATATTGGAGCGCTTTGCTTCGGGTACGGGGTAGTAGTTGATGTCTATAAC 3170 Query 62662 TTTATTGAGATT---TCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA 62718 ||| |||||||| | ||||||| ||| | || ||| || || ||||||| | Sbjct 3169 TTTGTTGAGATTGCGTGTGACAAT--CTTCG-TGACGGACTTTAGCTTCTCAAAATCATA 3113 Query 62719 TCGCCCATC---TATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTAC 62775 | ||| | ||||||||| || | ||||| ||||| | ||| || || || | Sbjct 3112 CGTCTTATCGGGCAGTACAAACATATTAAGTGCAATTGATGCTAAATTGCACACAGCAAT 3053 Query 62776 CTCAT--TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTT 62833 ||||| | | | || ||||| | ||||| ||||| || || ||||| || || Sbjct 3052 CTCATCCTTGGA--CGAATATTCAACGATCTCGGTGCAGAGGTTGCTACAGCGAATTGTA 2995 Query 62834 CCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTA 62893 || | ||| || ||||||||||| |||||| || ||||| || || || | || || Sbjct 2994 CCAATATTCTGCTGATTACTCTTACGGTTACATGCGTCCTTGTACAGCATATACGGCGTT 2935 Query 62894 CCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGAT 62953 || ||||| | ||| || || || || ||| | ||||||| || || Sbjct 2934 CCCGTTTCTACTTGACTTTGAATGATGGCAAACCAAAGATCTCGAGCTGGTACCTTACGA 2875 Query 62954 TTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACA 63013 |||| |||| |||||| ||| |||||| | || || || ||||| | Sbjct 2874 ATGTACTGACCTTCTGCTTCGTACTTTGTGTACAATTTATTAAATTCTTCACCCCAGCAA 2815 Query 63014 TTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACT 63073 | || |||||| || | | || ||||| | ||| || || || || || Sbjct 2814 TCAAACAATCCAGGGCACTTGTTAGGGCACATGAGACTCCATTCACCATCCTCGGAGACA 2755 Query 63074 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTC 63132 || | |||||| | |||||||||||| || || ||| || ||||||| || || || | Sbjct 2754 CGCTGCATAAATAAATCAGGAATCCAGAGCGC-ATAGAAGAGATCTC--GTGCT-CGTGC 2699 Query 63133 C---TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 63189 | || || || |||||||||||||| || ||||| | | ||||| |||||| || Sbjct 2698 CTTTTCCTTACCGGTATTCTTTTTAAGGTCTAGGAATTCAAAGATATCCCCATGCCAGGG 2639 Query 63190 TTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 63249 ||| | |||||| || | | || || || || || || || ||||| | ||| | || Sbjct 2638 TTCAAGGTATATTGCAAAGGCACCTGGGCGCTTATTCCCACCTTGATCAACGTAGCAGGC 2579 Query 63250 GGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGA 63309 || | || || || | | ||| || | | ||||| ||||| |||||||| || | Sbjct 2578 AGTAGTGTTGTAGACGCGAAGCATCGGTACGAGTCCATTCGATGTGCCATTGGTTCCAGC 2519 Query 63310 GATATAGCTTCCACTGGCACGAATATTACTAATTGAT-AGACCTATTCCCCCTGCCATTT 63368 || | || |||| || ||||| | | | | | | ||| || || ||||| | Sbjct 2518 AATGTGACTACCACGAGCTCGAAT-GCAGTGAGTATTAACACCAATCCCTCCTGCAGACT 2460 Query 63369 TAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCA 63428 | ||||||| |||||| |||| | ||||| ||||| || || ||||| ||||| || Sbjct 2459 TTGAGATTAGAGCGCATTGTTTCAGTGTATCGTAGATACCATCAATACTGTCATCAGCCA 2400 Query 63429 TGTTAAGTAGAAAACAGCTAGACATTTGGTGACG-ACT--AGTTCCCGCATTAAATAAGG 63485 || || || ||||| |||| | | ||| | ||| ||| | || ||| | | Sbjct 2399 TGGACAGGAGGAAACA---AGACGATAGCTGAGGCACTGGAGTGGCAGCTGCAAAGAGTG 2343 Query 63486 TAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGT 63545 | || || ||||| || || | || || || || |||||||||||||| |||| Sbjct 2342 TTGGTGATGCGTGCGTGAAATACCGTTGTGATAGAAGGTTGTACGTCTCAATGGCTGCAG 2283 Query 63546 CTATATCCCATT--GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTC 63603 | || | |||| |||||||| || | || ||||| | ||| ||||| || ||||| Sbjct 2282 CAATGT--CATTCCCGTGAATTCCCACAGATACTCGCATCAGCATATGCTGGGGCCTTTC 2225 Query 63604 AACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATA 63663 | |||| || | || |||| || || ||| | || | || || || |||||||| Sbjct 2224 AGCGATTTTCCCGCCGATCTTCATTAAATATGATCTCTCGAGTGTCTTGAAGCCAAAATA 2165 Query 63664 GTTGTA 63669 | |||| Sbjct 2164 GCTGTA 2159 >seq79 Length=216850 Score = 210 bits (232), Expect = 3e-49 Identities = 409/604 (68%), Gaps = 9/604 (1%) Strand=Plus/Plus Query 32646 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 32705 || || ||||| | ||| || || || ||||| || ||||| || | ||| | || Sbjct 76182 TGCTTGAACATTAGACACGCAAAGTCACAGTGGAGGCCCTCATCGCGTGAAATGAGCTCA 76241 Query 32706 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 32765 ||| ||||||||||||||||| | ||| || || ||||| || || || || || Sbjct 76242 TTGCTGAACGTGAGTCCGGGCATGATGCCGCGTGACTTGAGCCAGAAGATTGAGGCGAAG 76301 Query 32766 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCG 32825 || |||||||| || || ||||||||||||||||| | || || || || Sbjct 76302 CTACCGCTGAAGAAAATCCCCTCAACTGCCGCAAAGGCAATGACCCTTTCGCCGAAATTT 76361 Query 32826 GC------GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 32879 || |||| || ||||||| | ||||||||||||||||| || ||||| ||| Sbjct 76362 GCTTCCTGGCTGGCA---ATCCACTGGAGTGCCCAATCGGCCTTCTTCTTCACACACGGC 76418 Query 32880 ATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCA 32939 | ||||| || ||||| ||||| ||| || || | ||| | || |||||| Sbjct 76419 AGCGTCTCGATGGCATTGAAGAGGAAGTCCTTCTCCTGCGGATCCCGTATGTACGTATCA 76478 Query 32940 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAG 32999 || | | ||| |||||||| ||| | || || ||||| || || || || |||||| Sbjct 76479 ATGAGCAAACTGTACATTTCGCTATGTACATTCTCCATGGCAATCTGGAAGCCATAGAAG 76538 Query 33000 CATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACT 33059 ||| ||||| || || || || || || || || || | | ||| ||||| || Sbjct 76539 AATCGTGCCTCTGTGATTTGCACCTCCTGACTGAAGCGCTCCACGAGATTCTCATTTACA 76598 Query 33060 ATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGT 33119 || || || || ||||| || |||| || || | || || | ||||| Sbjct 76599 ATCCCATCGGATGCCGCAAAGAATGCCAGGACGTGGCTAATGAATTTCCTTTCGCAATCC 76658 Query 33120 GTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAAT 33179 | | |||||| | || ||||| |||| || ||||| || |||||||||||| Sbjct 76659 TTCAAAGCATTCCAGTGATCCATATCCCGGGATAGGTCTACTTCCTCAACTGTCCAAAAT 76718 Query 33180 GATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACA 33239 || ||||| |||||||| ||||| | ||| | || || |||||||| || || | |||| Sbjct 76719 GAGGCCTCGGCCTTTTTGTACATCTCCCACACATCGTGGTATTGAATGGGGAAGACAACA 76778 Query 33240 AATC 33243 |||| Sbjct 76779 AATC 76782 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 33128 ATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTC 33187 |||||| | || ||||| |||| || ||||| || |||||||||||||| ||||| Sbjct 78676 ATTCCAGTGATCCATATCCCGGGATAGGTCTACTTCCTCAACTGTCCAAAATGAGGCCTC 78735 Query 33188 TGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATC 33243 |||||||| ||||| | ||| | || || |||||||| || || | |||||||| Sbjct 78736 GGCCTTTTTGTACATCTCCCACACATCGTGGTATTGAATGGGGAAGACAACAAATC 78791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633540661947200