Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq79 300 2e-76 seq763 125 8e-24 >seq79 Length=216850 Score = 300 bits (332), Expect = 2e-76 Identities = 577/838 (69%), Gaps = 26/838 (3%) Strand=Plus/Plus Query 92896 CTTTTCACCGATCAACTCGTACAATAAT-CTATCAGCTACAAATTCTATGTACTGAGACA 92954 ||||||| | |||||| |||| || | ||| || || ||||| |||||||| |||| Sbjct 76001 CTTTTCAACACCCAACTCC-ACAAGAAGACGATCTGCCACGAATTCAATGTACTGCGACA 76059 Query 92955 TCAAATCACAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCT 93014 | | | |||||||| || || | ||||| || || || || | ||| || | || Sbjct 76060 TGAGTTGGCAATTCATGCCCAGCATGTCAACAGGAAGGGCATCTGTGAGGAATTCCTGCT 76119 Query 93015 CGATTACAACGGCTTCTTTCAAGATTTCTATTA--CTCTACTATTTGGTGGTTTTTGTAC 93072 | || || ||||| | |||||| || | | || || ||| || || || || Sbjct 76120 CAATGGTCACAGCTTCGCGAATGATTTCGATGATGCGCTCCT--TTGAGGGCTTCTGCAC 76177 Query 93073 GACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAA 93132 || | ||| |||||| ||||||||||| || | || || || ||||| || | Sbjct 76178 GAGGTGCTTGAACATTAGACACGCAAAGTCACAGTGGAGGCCCTCATCGCGTGAAATGAG 76237 Query 93133 CTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGC 93192 |||||||||||| || | || || | | || ||| ||||||||| || ||||| || Sbjct 76238 CTCATTGCTGAACGTGAGTCCGGGCATGATGCCGCGTGACTTGAGCCAGAAGATTGAGGC 76297 Query 93193 AAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAA 93252 || ||||| || || || || || || || ||||| || | | | |||| | || Sbjct 76298 GAAGCTACCGCTGAAGAAAATCCCCTCAACTGCCGCAAAGGCAATGACCCTTTCGCCGAA 76357 Query 93253 ATTTGCGGAATTACT-GCTG---ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATAC 93308 |||||| || || |||| ||||| | | ||||||||||| || ||||| | || Sbjct 76358 ATTTGC----TTCCTGGCTGGCAATCCACTGGAGTGCCCAATCGGCCTTCTTCTTCACAC 76413 Query 93309 AAGGTAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATG 93368 | || || || ||||| || || || ||| | || ||| | || ||| |||||||| | Sbjct 76414 ACGGCAGCGTCTCGATGGCATTGAAGAGGAAGTCCTTCTCCTGCGGATCCCGTATGTACG 76473 Query 93369 TATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGT 93428 |||| || | || | |||||||| ||| ||||||||||| ||||| ||||| || | Sbjct 76474 TATCAATGAGCAAACTGTACATTTCGCTATGTACATTCTCCATGGCAATCTGGAAGCCAT 76533 Query 93429 AGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCAT 93488 |||| ||| || || ||||| ||||| || ||| || | ||| |||||||| |||| Sbjct 76534 AGAAGAATCGTGCCTCTGTGATTTGCACCTCCTGACTGAAGCGCTCCACGAGATTCTCAT 76593 Query 93489 TGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAAT--GTTTCTC 93546 | || || ||||||||||| ||||| || |||| | || | || || | |||| | Sbjct 76594 TTACAATCCCATCGGATGCCGCAAAGAATGCCAGGACGTGGCTAATGAATTTCCTTTCGC 76653 Query 93547 ATCATCTTT--AAGCTTATCCCAATCGGAT--AGATCTTTTGAAAGATCGACTTCTTCGA 93602 | ||| || |||| || ||| | ||| | ||| || || || ||||| || | Sbjct 76654 A--ATCCTTCAAAGC--ATTCCAGT--GATCCATATCCCGGGATAGGTCTACTTCCTCAA 76707 Query 93603 CAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTG 93662 | |||||||| || || || || ||||||||||| ||||| | || || |||||||| | Sbjct 76708 CTGTCCAAAATGAGGCCTCGGCCTTTTTGTACATCTCCCACACATCGTGGTATTGAATGG 76767 Query 93663 GAAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTCTAGTTGTGGGTCAAA 93720 | || | ||||| || || || || |||| ||||| |||| |||||| || Sbjct 76768 GGAAGACAACAAATCGTCGTGGATTCTCCCGGAGTAGGGGCTCAAGTTCTGGGTCGAA 76825 >seq763 Length=91317 Score = 125 bits (138), Expect = 8e-24 Identities = 80/86 (93%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAG 126321 ||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||| Sbjct 39461 CAGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAG 39402 Query 126322 CGTGGGTTCGAACCCCACACCTGACA 126347 |||||||||||||||||||||||||| Sbjct 39401 CGTGGGTTCGAACCCCACACCTGACA 39376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556780528515680