Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1377 96.9 7e-15 seq185 96.9 7e-15 seq1082 95.1 2e-14 seq99 95.1 2e-14 seq2 93.3 9e-14 seq1766 91.5 3e-13 seq970 91.5 3e-13 seq142 89.7 1e-12 seq199 87.8 4e-12 seq3 87.8 4e-12 >seq1377 Length=57412 Score = 96.9 bits (106), Expect = 7e-15 Identities = 70/80 (88%), Gaps = 1/80 (1%) Strand=Plus/Plus Query 142497 TGAG-ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGG 142555 |||| ||||||||| |||||||||||||||||| ||||||||||||| |||||||| Sbjct 52353 TGAGTATAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGG 52412 Query 142556 GTTCGAGCCCCACATCGGGC 142575 ||||||||||||| | |||| Sbjct 52413 GTTCGAGCCCCACGTAGGGC 52432 >seq185 Length=285998 Score = 96.9 bits (106), Expect = 7e-15 Identities = 70/80 (88%), Gaps = 1/80 (1%) Strand=Plus/Plus Query 142497 TGAG-ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGG 142555 |||| ||||||||| |||||||||||||||||| ||||||||||||| |||||||| Sbjct 94228 TGAGTATAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGG 94287 Query 142556 GTTCGAGCCCCACATCGGGC 142575 ||||||||||||| | |||| Sbjct 94288 GTTCGAGCCCCACGTAGGGC 94307 >seq1082 Length=54021 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 ||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 21509 ATAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 21450 Query 142561 AGCCCCACATCGGGC 142575 |||||||| | |||| Sbjct 21449 AGCCCCACGTTGGGC 21435 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 21751 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 21810 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 21811 CCCCACGTTGGGC 21823 >seq99 Length=211455 Score = 95.1 bits (104), Expect = 2e-14 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 142499 AGATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTT 142558 ||| ||||||| |||||||||||||||||| ||||||||||||| ||||||||||| Sbjct 4444 AGACAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTT 4503 Query 142559 CGAGCCCCACATCGGGC 142575 |||||||||| | |||| Sbjct 4504 CGAGCCCCACGTTGGGC 4520 >seq2 Length=704064 Score = 93.3 bits (102), Expect = 9e-14 Identities = 68/79 (86%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 142497 TGAGATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGG 142556 || || ||||||| |||||||||||||||||| ||||||||||||| ||||||||| Sbjct 453129 TGCGACAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGG 453188 Query 142557 TTCGAGCCCCACATCGGGC 142575 |||||||||||| | |||| Sbjct 453189 TTCGAGCCCCACGTTGGGC 453207 >seq1766 Length=21396 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 6026 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 5967 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 5966 CCCCACGTTGGGC 5954 >seq970 Length=45459 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 19832 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 19891 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 19892 CCCCACGTTGGGC 19904 >seq142 Length=162468 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 57912 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 57853 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 57852 CCCACGTTGGGC 57841 >seq199 Length=231483 Score = 87.8 bits (96), Expect = 4e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| || ||||||| ||| ||||||||||||||||||||||||||| |||||||||| | Sbjct 200179 GTCCCTTTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGCGGGTTCGATC 200120 Query 142113 CCCGCCAGAGA 142123 ||||| || || Sbjct 200119 CCCGCAAGGGA 200109 >seq3 Length=592779 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 366370 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 366311 Query 142563 CCCCAC 142568 |||||| Sbjct 366310 CCCCAC 366305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027684933258412