Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq7756 98.7 2e-17 seq83 98.7 2e-17 >seq7756 Length=5018 Score = 98.7 bits (108), Expect = 2e-17 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 3332 ACCCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTT 3391 |||| ||| | | || ||||||| | | || ||| || || ||||||||||| || | Sbjct 3060 ACCCAATGGCGAGGGTTTTTCCAAAAGTTACAAAATGCACATTCCACAAATACGGCCCAT 3001 Query 3392 CGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGA 3451 |||| || | || | ||| ||||||||| | || ||| ||| | |||||||||| Sbjct 3000 CGGGGAGTGTGCAGAAATTCGACGGACTCTGCGTACTACCGCTGAATATTGTCAACGAGA 2941 Query 3452 AGATCTACATTTTCCTCTGGTTCTGGTTC 3480 | |||||| | |||||||||||||||||| Sbjct 2940 AAATCTACGTGTTCCTCTGGTTCTGGTTC 2912 >seq83 Length=194262 Score = 98.7 bits (108), Expect = 2e-17 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 3332 ACCCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTT 3391 |||| ||| | | || ||||||| | | || ||| || || ||||||||||| || | Sbjct 176662 ACCCAATGGCGAGGGTTTTTCCAAAAGTTACAAAATGCACATTCCACAAATACGGCCCAT 176721 Query 3392 CGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGA 3451 |||| || | || | ||| ||||||||| | || ||| ||| | |||||||||| Sbjct 176722 CGGGGAGTGTGCAGAAATTCGACGGACTCTGCGTACTACCGCTGAATATTGTCAACGAGA 176781 Query 3452 AGATCTACATTTTCCTCTGGTTCTGGTTC 3480 | |||||| | |||||||||||||||||| Sbjct 176782 AAATCTACGTGTTCCTCTGGTTCTGGTTC 176810 Score = 98.7 bits (108), Expect = 2e-17 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 3332 ACCCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTT 3391 |||| ||| | | || ||||||| | | || ||| || || ||||||||||| || | Sbjct 181095 ACCCAATGGCGAGGGTTTTTCCAAAAGTTACAAAATGCACATTCCACAAATACGGCCCAT 181154 Query 3392 CGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGA 3451 |||| || | || | ||| ||||||||| | || ||| ||| | |||||||||| Sbjct 181155 CGGGGAGTGTGCAGAAATTCGACGGACTCTGCGTACTACCGCTGAATATTGTCAACGAGA 181214 Query 3452 AGATCTACATTTTCCTCTGGTTCTGGTTC 3480 | |||||| | |||||||||||||||||| Sbjct 181215 AAATCTACGTGTTCCTCTGGTTCTGGTTC 181243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12478425882000