Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq1371 123 2e-23 >seq1371 Length=16595 Score = 123 bits (136), Expect = 2e-23 Identities = 212/305 (70%), Gaps = 2/305 (1%) Strand=Plus/Plus Query 20135 GGAAAGGGACGTGGAGTGCGCGTCAGCTGCAGCCGTAGTGGCTCTATATGCGTTTTGTAG 20194 || ||||| ||| |||||| |||| ||| ||| || || |||| || | |||| Sbjct 8600 GGGAAGGGTTTTGGGGTGCGCTTCAGTTGCTCCCGGAGGGGTTCTACGTGATTCAAGTAG 8659 Query 20195 ATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCA 20254 | || ||||| || | ||||| | || || || || | ||| | || | || ||| Sbjct 8660 ACATGAGCATCACCGAGGGTGTGCACGAAGTCTCCTGGCTTGAGATCTGTGATTTGGGCA 8719 Query 20255 AGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCT 20314 | ||| || | ||| | ||||||||||||||| || || || |||| |||||||| Sbjct 8720 ATCATTCGTGTGAGGAGAGCATAGCTGGCAATGTTGAATGGTACCCCCAGTCCCATGTCG 8779 Query 20315 CCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTG-ACATAA 20373 | || | ||||||| || || || ||||| || | || || || ||||| ||| | Sbjct 8780 GCTGAACGTTGATACATTTGGCACGAGAGCTCTCCATTGGCCACGTAGAATTGTACA-AG 8838 Query 20374 CAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATAAT 20433 |||||||||| || |||||||| | | | ||| | || ||||| |||| |||||| Sbjct 8839 GCAGTGACAGGGTGGGAGCGCCATTATGGGGAGATCCACAGGATTCCATGCACTCATAAT 8898 Query 20434 GATTC 20438 ||||| Sbjct 8899 GATTC 8903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441309176110880