Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq24 109 5e-19 >seq24 Length=280856 Score = 109 bits (120), Expect = 5e-19 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || |||||| || ||||| || ||||| |||||||| | || || ||| | || Sbjct 39558 AGAACGAGATGAG--GTAGATTCCTTCTGAATATTGTAATCGGAGAGCGTACGCCCATCC 39501 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || |||||||| ||| | || | ||||||||||| || ||||| || || || || Sbjct 39500 TCGAGTTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC 39441 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || ||| ||| ||| ||| | |||||| | || || || | ||| | |||| Sbjct 39440 TGGATCTTTGCCTTCACATTCTCAATCGTATCAGATGGCTCGACCTCAAGAGTGATGGTC 39381 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTAA 64448 || || || ||||| || || || || |||||| ||| Sbjct 39380 TTACCCGTTAAAGTCTTCACAAAGATCTGCATTCTAA 39344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499572776202080