Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq183 87.8 1e-12 seq284 84.2 2e-11 >seq183 Length=181677 Score = 87.8 bits (96), Expect = 1e-12 Identities = 127/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 108475 GATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAACGCCAACAGG 108534 |||||| ||||||| ||||| | |||||| ||| ||||| || ||||| |||| | Sbjct 33270 GATCACCGGGTTCATCACAAATTCTCTGAAACGGACGCCGATCCTCACAATTCCAATCGA 33329 Query 108535 GGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGACGTGATCTCG 108594 || |||| || | |||||||||||||||||||||| || |||| || || || | | Sbjct 33330 GGTTTCTTCTTTGCTCACGTGGGATGGCTCATGATGAAGAAACACCCTGATGTCAT-TAG 33388 Query 108595 GCCGGTCGA-AAAATGGACATGACGGACATATACTCCGATCCGGTGGTAGTGTGGCA 108650 || | | | ||||||||| ||||| | | ||||| ||||| |||||| Sbjct 33389 AAAGGGCAACCAGGTGGACATGAGTGACATTTTGGCTGATCCTGTGGTGCAGTGGCA 33445 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 108859 GAAAACAAATTGGTGGCGGCGTTGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTG 108918 || ||||||| ||||| ||| || | || ||||| ||||||||||||||||| || Sbjct 48645 GAGAACAAATCAGTGGCTATGTTTGCATTTGGAGAGGGTTGGCACAACTACCACCATGTC 48704 Query 108919 TTCCCCTACGACTACAAGGCCGCCGAGTTGGGGAACGAC 108957 ||||| | ||||||||| ||||||| ||||| ||| || Sbjct 48705 TTCCCATGGGACTACAAGACCGCCGAATTGGGCAACTAC 48743 >seq284 Length=149482 Score = 84.2 bits (92), Expect = 2e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 108466 TGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAAC 108525 ||||| | |||||||||||||||||||||| | | ||||| | || || || ||||| Sbjct 30846 TGGGTACGAGATCACAGGGTTCACCACAAGTTCACAGACACCAATGCTGATCCTCACAAT 30787 Query 108526 GCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGAC 108585 || | ||||||| ||||| || |||| |||||||||| | ||| ||||||| Sbjct 30786 TCCCGTCGTGGGTTCTTCTTCTCCCATATGGGTTGGCTCATGACAAAGAAGCACCCCGAT 30727 Query 108586 GTGA 108589 |||| Sbjct 30726 GTGA 30723 Score = 84.2 bits (92), Expect = 2e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 108466 TGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAAC 108525 ||||| | |||||||||||||||||||||| | | ||||| | || || || ||||| Sbjct 35150 TGGGTACGAGATCACAGGGTTCACCACAAGTTCACAGACACCAATGCTGATCCTCACAAT 35091 Query 108526 GCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGAC 108585 || | ||||||| ||||| || |||| |||||||||| | ||| ||||||| Sbjct 35090 TCCCGTCGTGGGTTCTTCTTCTCCCATATGGGTTGGCTCATGACAAAGAAGCACCCCGAT 35031 Query 108586 GTGA 108589 |||| Sbjct 35030 GTGA 35027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381719143264608