Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2439 242 4e-59 seq1176 114 1e-20 seq825 102 8e-17 >seq2439 Length=24097 Score = 242 bits (268), Expect = 4e-59 Identities = 1197/1882 (64%), Gaps = 54/1882 (3%) Strand=Plus/Minus Query 152709 GCCGCAGGCTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCGCAGCGCCACGAGTAA 152768 || || || || ||||||||||||||||| |||||||||||||| ||| | | Sbjct 3966 GCAGCTGGTTTAGTGCGCAAATAATACATCCCCGTTTTGAGGCCCATTTTCCAGGCATGG 3907 Query 152769 TTGTGAATCGAAGTCA---TCACAGCGTACGTCGGTTGCGCCACGAACAGATTAAACGAT 152825 ||||| ||||| | || || || | |||| |||||| | | || || ||| Sbjct 3906 AAATGAATTGAAGTGAGTTTCCCATAGT---TAGGTTCTGCCACGTAAATGTTGAATGAT 3850 Query 152826 TGGCTCTGATCTATGAAAGCGTTACGGTCGGCCGCCATCTCAATCATGCGTTTTGCCTTC 152885 || || ||||| ||||| || |||||| || ||||| |||||||| ||| |||| Sbjct 3849 TGACTTTGATCAATGAAGGCCCCACGGTCAGCTGCCATTTCAATCATTGTTTTCACCTTG 3790 Query 152886 ATCTCCCAGGCGGTTTTGTACAAATTTTTAACGCTATCC---GGTATACCTTCAATGTTC 152942 || ||||| ||||||| ||||| | || ||||| || || | ||| ||| Sbjct 3789 ATTTCCCACACGGTTTTATACAACTCACGAA---TATCCTCAGGAATTTCCAGAATATTC 3733 Query 152943 TGAATAGAGCCCTTGTGTGCAA--AAATAGCGTTTCGTATTTCGGGCGTGTACACGTTCA 153000 || | |||||| |||| |||| || | | ||| ||||| | | | | | Sbjct 3732 TGCACAGAGCCATTGTTGGCAATTAATTTGTTCTTC--ATTTCATCATTCCAAAGGCGTA 3675 Query 153001 GTTTAATGAGGTCATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACACTC 153060 ||| | ||| || | | || | ||| |||||||| || || || | | || | Sbjct 3674 GTTCAGAGAGATCCTTTAACAGATGGCTGTTAACCACTTGGAATTCCCCAGAAAGAACAC 3615 Query 153061 GTCTCAAATATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAG 153120 | | || | |||| ||| | ||||| |||||||| |||||||| || ||||||| Sbjct 3614 GACGGGTGTACATATTGGATGTGTAGGGTTCGAAGGATTCATTATTGCCAAGAATTTGAG 3555 Query 153121 CCGTGGTTGCGGTCGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAA 153180 |||| | || || ||||| ||||| | || ||||| || | || ||| || Sbjct 3554 CCGTAGAAGCCGTTGGCATTGGAGCCACAAGCAGGGAATTTCGAACACCATGCTGAGCAA 3495 Query 153181 TGTCGTCCTTCAACGCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGT 153240 | | ||||||| | | ||||| ||| || ||| || | |||||||| |||| Sbjct 3494 TCTTTGCCTTCAATTCATCCCAATTCCAAAGATCCGTTGGCTTTCTATTCCACATATCGT 3435 Query 153241 ACTGTAACACTCCTCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGT- 153299 |||| | | ||| || | ||||| || |||| || ||| || | Sbjct 3434 ACTGCAGAATTCCCTTGCTTACTGGACTTCCATTGTACGTCTCATATGGTCCGA-GCTTC 3376 Query 153300 TGGGCCAGTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTA 153359 | || || || || |||||||| || || |||||||| |||||||| |||||||| Sbjct 3375 TCAGCGAGCTCACAACTAGCCTCAAGAGCTCCATAGTAAATGGTTTCAAAGATTTGTTGG 3316 Query 153360 TTGAGAACGGCCGCTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCC 153419 ||||| ||||||| ||| || || || | ||||| || | | || || || Sbjct 3315 TTGAGTTTCTTGGCTTCTTTGCTATCATATGGGAGGCGCATGAGAATGTAAGCATCCGCT 3256 Query 153420 AGACCCTGGATACCGACGCCGATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCT 153479 ||||| || | || | || || |||| || | ||| |||| | || | | Sbjct 3255 AGACCTTGAACTCCAATTCCAATCGGTCTGTGTCGCATATTGGAGCGCTTTGCTTCGGGT 3196 Query 153480 ATGGGATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATC 153539 | ||| |||| ||| || |||| ||||||||| ||||| || | || || | Sbjct 3195 ACGGGGTAGTAGTTGATGTCTATAACTTTGTTGAGATTGCGTGTGACAATCTTCGTGACG 3136 Query 153540 GCCTTAAGTTTCTCGAAATCATAGGTCATTTCGTCGACGCGTACGCATCGATTCACGGCA 153599 | ||| || ||||| |||||||| ||| | ||| | |||| | ||| | ||| Sbjct 3135 GACTTTAGCTTCTCAAAATCATACGTCTTATCGGGCA---GTACAAACATATTAAGTGCA 3079 Query 153600 ATAGACGCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTG--TACTGCACGATCTCGG 153657 || || || | ||| || || || |||| || | | | | || | |||||||||| Sbjct 3078 ATTGATGCTAAATTGCACACAGCAATCTCATC--CTTGGACGAATATTCAACGATCTCGG 3021 Query 153658 CGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACG 153717 |||||||||||| || || || | ||| |||||||| || || || || || | Sbjct 3020 TGCAGAGGTTGCTACAGCGAATTGTACCAATATTCTGCTGATTACTCTTACGGTTACATG 2961 Query 153718 CGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT---AAACC 153774 |||| ||| | ||||| ||||| || || || ||||| ||| | ||| ||||| Sbjct 2960 CGTCCTTGTACAGCATATACGGCGTTCCCGTTTCTACTTGACTTTGAATGATGGCAAACC 2901 Query 153775 TATGCAGGTCCTGCGCTCGCACCCGCTGCCGA---TAGCGGCCCTC-GCTCTCGTATCGC 153830 | || || | ||| | || || ||| || | || || ||| ||||| Sbjct 2900 AA---AGATCTCGAGCTGGTAC---CTTACGAATGTACTGACCTTCTGCT-TCGTACTTT 2848 Query 153831 TCGTACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGA 153890 ||||| | | ||| || || || |||| || | || || |||| | || Sbjct 2847 GTGTACAATTTATTAAATTCTTCACCCCAGCAATCAAACAATCCAGGGCACTTGTTAGGG 2788 Query 153891 CACATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAG 153950 ||||| || ||| | | || || ||| || |||| || | ||| || | |||| Sbjct 2787 CACATGAGACTCCATTCACCATCCTCGGAGACACGCTGCATAAATAAATCAGGAATCCAG 2728 Query 153951 AGCGCGTACATGAGGTCGCGCGC-CTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGATT 154009 ||||| || | ||| || || || | ||| | ||| || | || ||| || | Sbjct 2727 AGCGCATAGAAGAGATCTCGTGCTCGTGC-CTTTTCCTTACCGGTATTCTTTTTAAGGTC 2669 Query 154010 GAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACG 154069 || | | |||| || | ||||||||||||| ||| | || | ||||||| || Sbjct 2668 TAGGAATTCAAAGATATCCCCATGCCAGGGTTCAAGGTATATTGCAAAGGCACCTGGGCG 2609 Query 154070 C---TTTCCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTC 154126 | || || || ||||| |||| || | || ||||| ||||||| | ||| ||| | Sbjct 2608 CTTATTCCCACCTTGATCAACGTAGCAGGCAGTAGTGTTGTAGACGCGAAGCATCGGTAC 2549 Query 154127 CAGGCCGCTTGCGGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATG 154186 || || | | ||||| ||||| | || | || || || || || | || Sbjct 2548 GAGTCCATTCGATGTGCCATTGGTTCCAGCAATGTGACTACCACGAGCTCGAATGCAGTG 2489 Query 154187 CACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCT 154246 ||||| ||||| || || | ||||||| || |||||| | ||| || Sbjct 2488 AGTATTAACACCAATCCCTCCTGCAGACTTTGAGATTAGAGCGCATTGTTTCAGTGTATC 2429 Query 154247 GTAGATGCCGTCGATGCTATCGTC-GC---GGACGCCGAGCAAGAAACACGAACACATTT 154302 |||||| || || || || || || || |||| || | |||||| || | | | Sbjct 2428 GTAGATACCATCAATACTGTCATCAGCCATGGAC----AGGAGGAAACAAGACGATAGCT 2373 Query 154303 GCGGAATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGT-AAACAGTTTTTGG 154361 | || | | || | || | |||||| || || |||||||| ||| | || | Sbjct 2372 GAGGCACTGGAGTGGCAGCTGCAAAGAGTGTTGGTGATGCGTGCGTGAAATACCGTTGTG 2313 Query 154362 CTCATCATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCG 154421 | | | | |||||| || ||||| | | || |||| |||||||| || | | Sbjct 2312 AT-AGAAGGTTGTACGTCTCAATGGCTGCAGCAATGTCATTCCCGTGAATTCCCACAGAT 2254 Query 154422 ACGCGCATGAGCATGTGCTGCGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATAT 154481 || ||||| ||||| ||||| || | ||| |||| | | | | ||||||| | |||| Sbjct 2253 ACTCGCATCAGCATATGCTGGGGCCTTTCAGCGATTTTCCCGCCGATCTTCATTAAATAT 2194 Query 154482 CCATTTTCGAGGGTTTTGTAACCGAAATACTTGTATTCAAAATCTAGCTCATGAGCGATG 154541 | ||||| || ||| | || ||||| |||| || | || | ||||| ||||| Sbjct 2193 GATCTCTCGAGTGTCTTGAAGCCAAAATAGCTGTACCCATAGTCCCGATCATGCACGATG 2134 Query 154542 GCCGCATCGAGCGTCGCGGCAT 154563 |||| || ||| || | |||| Sbjct 2133 GCCGAATTAAGCTTCTCAGCAT 2112 >seq1176 Length=25388 Score = 114 bits (126), Expect = 1e-20 Identities = 145/197 (74%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||| ||||| || |||||||||||| || |||||| || || || || || |||| Sbjct 17297 TTGATTCCTTCTGGATGTTGTAGTCGGACAATGTACGCCCATCTTCCAGCTGCTTCCCGG 17356 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTT 138537 |||| |||||||| || || || || || ||||||||||| ||| |||| | |||| Sbjct 17357 CGAAGATGAGACGCTGCTGATCTGGCGGAATGCCTTCTTTGTC-CTGAATTTTAGCTTTT 17415 Query 138538 AATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 | | || | ||| || | || ||| ||||||| || | ||| || || || || ||| Sbjct 17416 ACATTCTCGATGGTATCTGACGGCTCAACCTCGAGGGTGATCGTCTTCCCTGTGAGTGTT 17475 Query 138598 TTTACAAAAATCTGCAT 138614 || ||||| |||||||| Sbjct 17476 TTCACAAAGATCTGCAT 17492 >seq825 Length=38805 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||||| || ||||| | | | |||||||| || |||||||||||| Sbjct 11870 CCACCACGAAGACGCAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 11929 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || ||| ||||| || || || |||| | |||| |||||||| || |||||||| Sbjct 11930 AGGGTGCGCCCATCCTCTAGCTGCTTCCCGGCAAAGATGAGACGCTGCTGATCCGGAGGG 11989 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || ||||| || ||| |||| | || | | ||| | || || | | || || Sbjct 11990 ATTCCCTCTTTATC-CTGAATTTTCGCCTTGACATTTTCAATTGTATCCGAGGGTTCGAC 12048 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || || || |||||||| || ||||||||||| Sbjct 12049 CTCAAGGGTGATGGTCTTCCCCGTGAGAGTTTTCACGAAAATCTGCAT 12096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496190863775040