Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq2 109 7e-19 >seq2 Length=704064 Score = 109 bits (120), Expect = 7e-19 Identities = 256/376 (68%), Gaps = 8/376 (2%) Strand=Plus/Plus Query 12696 ATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTC 12755 |||| | ||||||||| || || || || ||||| | || |||||||| | ||| ||| Sbjct 341627 ATCTGCCTATCAAAGCGTCCCGGACGCAGCAGGGCCTTATCGAGGATATCCACGCGATTC 341686 Query 12756 GTCGCCGCGATGACAACGATGCCCGTC-TCGTTATCGAAGCCATCCATCTCAGTCAAG-A 12813 || ||||| | || |||| || |||| || |||||||||||||||| |||| | Sbjct 341687 GTTGCCGCCAAAACGACGACATTTGTGGTCGT-ATTGAAGCCATCCATCTCAA-CAAGCA 341744 Query 12814 GTTGATTGATGGTTTGTTCACGTTCATCATTCGCGGGCATACCACCCGCACTGCG-TTGC 12872 | ||||||| || | || | || || | | | | | ||| | |||| Sbjct 341745 GCTGATTGAGCGTATTCTCCTGCTCTGAATGCCCACCGAAGCTCTTCCCACCTCTCTTGC 341804 Query 12873 TTACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGGCAACT 12932 || || ||||| |||||||||||||||| |||||||| || || ||||| | Sbjct 341805 GCCCC-ACAGCGTCGATTTCGTCAATGAAAAGAATACACGGAGCATGTTTCCGGGCCATG 341863 Query 12933 TCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCG 12992 | || ||||||||||| || | || || || |||||||| || | ||| | | Sbjct 341864 GCGAACATATCTCGCACCCTTGACGGCCCTACGCCAACAAACATTTCGAGAAATTCCGAT 341923 Query 12993 GCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGT 13051 ||| ||| || ||| ||||| || || | ||||| || | || ||| ||||| || Sbjct 341924 CCGG-ACACTGTGATAAAGGGCACATTCGCCTCACCGGCTGTTGCCTTGGCCAGGAGAGT 341982 Query 13052 CTTCCCCGTCCCTGGT 13067 ||||||||| || ||| Sbjct 341983 CTTCCCCGTACCCGGT 341998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613418762937120