Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq79 159 6e-34 >seq79 Length=216850 Score = 159 bits (176), Expect = 6e-34 Identities = 411/611 (67%), Gaps = 15/611 (2%) Strand=Plus/Plus Query 159755 TCTGCCACAAATTCGATGTAGCTAC-ACATCTGCTCACAGTTGATCCCCAGCAGCCTAAC 159813 |||||||| ||||| ||||| || | |||| | | || || || ||||||| ||| Sbjct 76032 TCTGCCACGAATTCAATGTA-CTGCGACATGAGTTGGCAATTCATGCCCAGCATGTCAAC 76090 Query 159814 GGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGA 159873 || || || || | || || |||| |||||| || |||||| | || | ||| Sbjct 76091 AGGAAGGGCATCTGTGAGGAATTCCTGCTCAATGGTCACAGCTTCGCGAATGATTT-CGA 76149 Query 159874 -GACACGTTCGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGT 159932 || || || | ||||| || | ||| ||| |||| || |||||||||| Sbjct 76150 TGATGCGCTCCTTTGAGGGCTTCTGCACGAGGTG---CTTGAACATTAGACACGCAAAGT 76206 Query 159933 CGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGA 159992 | ||||| || ||||| || || || |||| ||| ||| | |||| || ||||||| Sbjct 76207 CACAGTGGAGGCCCTCATCGCGTGAAATGAGCTCATTGCTGAACGTGAGTCCGGGCATGA 76266 Query 159993 TCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCA 160052 | || || | |||||||| || || | || || |||||| || || |||||||| | Sbjct 76267 TGCCGCGTGACTTGAGCCAGAAGATTGAGGCGAAGCTACCGCTGAAGAAAATCCCCTCAA 76326 Query 160053 CGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGG--GTCCACCT 160110 | |||||||| || | || ||| || || ||| || || || | ||| ||||| Sbjct 76327 CTGCCGCAAAGGCAATGACCCTTTCGCCGAAATTTGC-TTCCTGGC-TGGCAATCCACTG 76384 Query 160111 TTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCG-CTCGACGGCGTTAAACAATC 160169 ||||| || |||||||| | ||||||| ||| ||||| ||| || || | Sbjct 76385 GAGTGCCCAATCGGCCTTCTTCTTCACACACGGCA-GCGTCTCGATGGCATTGAAGAGGA 76443 Query 160170 TGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGT 160229 ||||| ||||| | |||| || ||| |||| ||| ||||||||| | Sbjct 76444 AGTCCTTCTCCTGCGGATCCCGTATGTACGTATCAATGAGCAAACTGTACATTTCGCTAT 76503 Query 160230 GCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTC-CAGATACTGCACC 160288 | ||||| || ||||| ||||| ||| ||||| || ||||| ||| |||||| Sbjct 76504 GTACATTCTCCATGGCAATCTGGAAGCCATAGAAGAATCGTGCCTCTGTGAT-TTGCACC 76562 Query 160289 TCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAA 160348 ||||| |||| | | | ||||| |||| || | ||| |||| ||||||||||| Sbjct 76563 TCCTGACTGAAGCGCTCCACGAGATTCTCATTTACAATCCCATCGGATGCCGCAAAGAAT 76622 Query 160349 GCCAACACGTG 160359 |||| ||||| Sbjct 76623 GCCAGGACGTG 76633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795040578377920