Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq24 113 5e-20 seq825 104 3e-17 seq1176 84.2 2e-11 >seq24 Length=280856 Score = 113 bits (124), Expect = 5e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| || |||||||| ||||| || || ||| | || ||||| |||||||| || || Sbjct 39539 TCCTTCTGAATATTGTAATCGGAGAGCGTACGCCCATCCTCGAGTTGCTTGCCAGCAAAG 39480 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| ||||||||||| | || | || |||||||||| |||||| ||| | || Sbjct 39479 ATCAAACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTTGCCTTCACATTC 39420 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||| || | || || || | |||||||| || ||||| | || || ||| Sbjct 39419 TCAATCGTATCAGATGGCTCGACCTCAAGAGTGATGGTCTTACCCGTTAAAGTCTTCACA 39360 Query 46583 AAGATTTGCATT 46594 ||||| |||||| Sbjct 39359 AAGATCTGCATT 39348 >seq825 Length=38805 Score = 104 bits (114), Expect = 3e-17 Identities = 155/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| ||||| ||| | || |||||| ||||| ||||||||||| || |||||| | Sbjct 11881 ACGCAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGCCC 11940 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || |||||||| ||||| || || | |||||||| || | || | | ||| || Sbjct 11941 ATCCTCTAGCTGCTTCCCGGCAAAGATGAGACGCTGCTGATCCGGAGGGATTCCCTCTTT 12000 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 ||| || ||| ||||| | | | || || | ||| || || | ||||| Sbjct 12001 ATCCTGAATTTTCGCCTTGACATTTTCAATTGTATCCGAGGGTTCGACCTCAAGGGTGAT 12060 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 ||| || ||||| || ||||| || || || ||||||||| Sbjct 12061 GGTCTTCCCCGTGAGAGTTTTCACGAAAATCTGCATTTTG 12100 >seq1176 Length=25388 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| ||||||||||| | || ||| | || || |||||||| |||||||| Sbjct 17302 TCCTTCTGGATGTTGTAGTCGGACAATGTACGCCCATCTTCCAGCTGCTTCCCGGCGAAG 17361 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | |||||||| || | ||| | || || |||||| || || || | || Sbjct 17362 ATGAGACGCTGCTGATCTGGCGGAATGCCTTCTTTGTCCTGAATTTTAGCTTTTACATTC 17421 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | || || || || || || | ||||| || || || || || ||||| ||| Sbjct 17422 TCGATGGTATCTGACGGCTCAACCTCGAGGGTGATCGTCTTCCCTGTGAGTGTTTTCACA 17481 Query 46583 AAGATTTGCAT 46593 ||||| ||||| Sbjct 17482 AAGATCTGCAT 17492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565156920884640