Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq79 327 1e-84 seq825 147 2e-30 seq1176 111 2e-19 >seq79 Length=216850 Score = 327 bits (362), Expect = 1e-84 Identities = 554/799 (69%), Gaps = 10/799 (1%) Strand=Plus/Plus Query 132730 TCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGCACC 132789 || |||||||| || ||||| ||||||||| || |||||| | ||||||| || Sbjct 76032 TCTGCCACGAATTCAATGTACTGCGACATGAGTTGGCAATTCATGCCCAGCATGTCAACA 76091 Query 132790 GGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTA 132849 || || || || ||||| || ||||| |||| || || ||| | |||||| | Sbjct 76092 GGAAGGGCATCTGTGAGGAATTCCTGCTCAATGGTCACAGCTTCGCGAATGATTTCGATG 76151 Query 132850 ACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAA 132909 | |||| || ||| ||||| | ||||||||||| | || |||||||| || Sbjct 76152 ATGCGCTCCTTTGAGGGCTTCTGCACGAGGTGCTTGAACATTAGACACGCAAAGTCACAG 76211 Query 132910 TGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCG 132969 || | |||||| || | |||||||| || |||||||| || | |||||||||| |||| Sbjct 76212 TGGAGGCCCTCATCGCGTGAAATGAGCTCATTGCTGAACGTGAGTCCGGGCATGATGCCG 76271 Query 132970 CGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCC 133029 ||| |||||||| || || | |||||| || || ||||| | ||||| || ||| Sbjct 76272 CGTGACTTGAGCCAGAAGATTGAGGCGAAGCTACCGCTGAAGAAAATCCCCTCAACTGCC 76331 Query 133030 GCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCC 133089 || || || | | | |||||||| | ||||| | |||||| ||||| | || ||| Sbjct 76332 GCAAAGGCAATGACCCTTTCGCCGAAATTTGCTTCCTGGCTGGCAATCCACTGGAGTGCC 76391 Query 133090 CATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGT--T 133147 || |||||||| | || || ||||||| ||| |||||||| || | | | | ||| | Sbjct 76392 CAATCGGCCTTCTTCTTCACACACGGCAGCGTCTCGATGGCATTGA--AGAGGAAGTCCT 76449 Query 133148 TCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAA---TACATTTCCGAGTGTA 133204 |||| | || || | ||| || || ||||| | || |||||||| |||| Sbjct 76450 TCTCCTGCGGATCCCGTATGTACGTATCAATGAG---CAAACTGTACATTTCGCTATGTA 76506 Query 133205 CGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTT 133264 | ||||||||||| || || ||||| || ||| | || ||||| | ||||| || | Sbjct 76507 CATTCTCCATGGCAATCTGGAAGCCATAGAAGAATCGTGCCTCTGTGATTTGCACCTCCT 76566 Query 133265 GAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCA 133324 || ||| ||||| || ||||| || || || || || ||| || || || || |||| Sbjct 76567 GACTGAAGCGCTCCACGAGATTCTCATTTACAATCCCATCGGATGCCGCAAAGAATGCCA 76626 Query 133325 GCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCT 133384 | ||||| | ||||| | | ||| || ||||| | ||||| | | ||| Sbjct 76627 GGACGTGGCTAATGAATTTCCTTTCGCAATCCTTCAAAGCATTCCAGTGATCCATATCCC 76686 Query 133385 TGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCC 133444 ||| ||||| || ||||| || |||||||| || |||||||| ||||||||||| || Sbjct 76687 GGGATAGGTCTACTTCCTCAACTGTCCAAAATGAGGCCTCGGCCTTTTTGTACATCTCCC 76746 Query 133445 ACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGCGCAACAGCG 133504 ||| || ||||| ||||| || | ||||| || || || || || || | || | Sbjct 76747 ACACATCGTGGTATTGAATGGGGAAGACAACAAATCGTCGTGGATTCTCCCGGAGTAGGG 76806 Query 133505 GCTCCGCTTGGGGGTCGAA 133523 |||| || |||||||| Sbjct 76807 GCTCAAGTTCTGGGTCGAA 76825 Score = 82.4 bits (90), Expect = 8e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 133386 GGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCA 133445 ||| ||||| || ||||| || |||||||| || |||||||| ||||||||||| ||| Sbjct 78697 GGATAGGTCTACTTCCTCAACTGTCCAAAATGAGGCCTCGGCCTTTTTGTACATCTCCCA 78756 Query 133446 CATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGCGCAACAGCGG 133505 || || ||||| ||||| || | ||||| || || || || || || | || || Sbjct 78757 CACATCGTGGTATTGAATGGGGAAGACAACAAATCGTCGTGGATTCTCCCGGAGTAGGGG 78816 Query 133506 CTCCGCTTGGGGGTCGAA 133523 ||| || |||||||| Sbjct 78817 CTCAAGTTCTGGGTCGAA 78834 >seq825 Length=38805 Score = 147 bits (162), Expect = 2e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 |||||||| || ||||| ||||| |||||||| || ||||||||| | || ||||| || Sbjct 12099 AAAATGCAGATTTTCGTGAAAACTCTCACGGGGAAGACCATCACCCTTGAGGTCGAACCC 12040 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | || | | ||| | || | ||||| | || ||||||||||| || | || Sbjct 12039 TCGGATACAATTGAAAATGTCAAGGCGAAAATTCAGGATAAAGAGGGAATCCCTCCGGAT 11980 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| ||||| | || || || ||||| || || | |||||||||| ||||||| Sbjct 11979 CAGCAGCGTCTCATCTTTGCCGGGAAGCAGCTAGAGGATGGGCGCACCCTCTCCGACTAC 11920 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||| ||||| | || || ||||||||||||||| Sbjct 11919 AACATCCAGAAGGAGTCCACCCTCCATTTGGTGCTGCGT 11881 >seq1176 Length=25388 Score = 111 bits (122), Expect = 2e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| ||||| || || || |||||| |||| || ||| | | Sbjct 17492 ATGCAGATCTTTGTGAAAACACTCACAGGGAAGACGATCACCCTCGAGGTTGAGCCGTCA 17433 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | |||| ||||| | |||||||| || ||||| | || || Sbjct 17432 GATACCATCGAGAATGTAAAAGCTAAAATTCAGGACAAAGAAGGCATTCCGCCAGATCAG 17373 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||| | ||| || || |||||||| || | ||| || | |||||||||| Sbjct 17372 CAGCGTCTCATCTTCGCCGGGAAGCAGCTGGAAGATGGGCGTACATTGTCCGACTACAAC 17313 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| |||||| | || || || | ||||| ||| Sbjct 17312 ATCCAGAAGGAATCAACACTCCACCTTGTGCTCCGT 17277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500100700090880