Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq2439 237 2e-57 seq79 109 7e-19 >seq2439 Length=24097 Score = 237 bits (262), Expect = 2e-57 Identities = 905/1409 (64%), Gaps = 30/1409 (2%) Strand=Plus/Plus Query 111933 CCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGT---CGC 111989 || ||||||||||| | ||| | || || |||| || | |||| |||| | ||| Sbjct 2552 CCGATGCTTCGCGTCTACAACACTACTGCCTGCTACGTTGATCAAGGTGGGAATAAGCGC 2611 Query 111990 AAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAG 112049 || | | ||| | || ||||| || ||||| | ||||||| | || ||||| || Sbjct 2612 CCAGGTGCCTTTGCAATATACCTTGAACCCTGGCATGGGGATATCTTTGAATTCCTAGA- 2670 Query 112050 TTGCGTCTCAACCAA----GGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCT 112105 | | || || ||| | || |||| || || |||||||||| || || Sbjct 2671 ---CCTTAAAAAGAATACCGGTAAGGAAAAGGCACGAGCACGAGATCTCTTCTATGCGCT 2727 Query 112106 CTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTG 112165 ||||||||| ||| | || ||| || | || ||| ||| | ||| |||| | || Sbjct 2728 CTGGATTCCTGATTTATTTATGCAGCGTGTCTCCGAGGATGGTGAATGGAGTCTCATGTG 2787 Query 112166 TCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACAC 112225 || ||||| || || | | ||| | |||||| || ||| | | ||||| Sbjct 2788 CCCTAACAAGTGCCCTGGATTGTTTGATTGCTGGGGTGAAGAATTTAATAAATTGTACAC 2847 Query 112226 AAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGC 112285 ||||||||| | |||| ||| | | | | ||| |||||| ||| | ||| || Sbjct 2848 AAAGTACGAAGCAGAAGGTCAGTACATTCGTAAGGTACCAGCTCGAGATCTTTGGTTTGC 2907 Query 112286 TATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAA 112345 || | | |||| || || || || || |||||||| ||||| ||||| ||||| Sbjct 2908 CATCATTCAAAGTCAAGTAGAAACGGGAACGCCGTATATGCTGTACAAGGACGCATGTAA 2967 Query 112346 CCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAAT 112405 || ||||||||||| ||||| | ||| || || ||||||||| || || || Sbjct 2968 CCGTAAGAGTAATCAGCAGAATATTGGTACAATTCGCTGTAGCAACCTCTGCACCGAGAT 3027 Query 112406 CTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCC 112465 | | |||| | | ||| ||||||| |||||||| || | |||||||| || || Sbjct 3028 CGTTGAATATTCGTCCAAGGATGAGATTGCTGTGTGCAATTTAGCATCAATTGCACTTAA 3087 Query 112466 CAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAA 112525 | || ||| || || ||||| | ||||| ||| || || | || ||||| Sbjct 3088 TATGTTTGTACTGCCCGA---TAAGACGTATGATTTTGAGAAGCTAAAGTCCGTCACGAA 3144 Query 112526 AACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGC 112585 | ||||||| || || |||| |||||| || | || | |||||||| || Sbjct 3145 GATTGTCACACGCAATCTCAACAAAGTTATAGACATCAACTACTACCCCGT----ACCCG 3200 Query 112586 TCGTAAA----TCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGG 112641 | ||| || |||||| ||||| | || ||||| | || || |||||||| |||| Sbjct 3201 AAGCAAAGCGCTCCAATATGCGACACAGACCGATTGGAATTGGAGTTCAAGGTCTAGCGG 3260 Query 112642 ATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGC 112701 ||| | |||||| |||| | ||| |||| | | ||||| ||| || |||| | Sbjct 3261 ATGCTTACATTCTCATGCGCCTCCCATATGATAGCAAAGAAGCCAAGAAACTCAACCAAC 3320 Query 112702 GTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTG 112761 || ||||| || || || | | ||||||||||| |||| ||| | || ||| Sbjct 3321 AAATCTTTGAAACCATTTACTATGGAGCTCTTGAGGCTAGTTGTGAGCTCGCTGAGAAGC 3380 Query 112762 ATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGG-GTGCTTCAATTTGAT 112820 || |||||||| || | | || ||||| | |||||| | || || | ||| Sbjct 3381 TCGGACCATATGAGACGTACAATGGAAGTCCAG-TAAGCAAGGGAATTCTGCAGTACGAT 3439 Query 112821 ATGTGGGAAGGTGAGACCAAGCTTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAG 112880 |||||| | | || | | | || | | ||||| | | |||| | || Sbjct 3440 ATGTGGAATAGAAAGCCAACGGATCTTTGGAATTGGGATGAATTGAAGGCAAAGATTGCT 3499 Query 112881 GAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAA 112940 || | ||| |||| || || | |||| ||||||||||| || || || || ||| Sbjct 3500 CAGCATGGTGTTCGAAATTCCCTGCTTGTGGCTCCAATGCCAACGGCTTCTACGGCTCAA 3559 Query 112941 ATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACC 113000 || | || |||||||||| ||| ||||||||||| | || || || | | Sbjct 3560 ATTCTTGGCAATAATGAATCCTTCGAACCCTACACATCCAATATGTACACCCGTCGTGTT 3619 Query 113001 CTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGT 113060 || | || || || | || |||| ||||| | | || ||| || | | Sbjct 3620 CTTTCTGGGGAATTCCAAGTGGTTAACAGCCATCTGTTAAAGGATCTCTCTGAACTACGC 3679 Query 113061 CTCTGGTCCAAGGATATGAAGGATCTCAT--GGTGAAAGCGGGTGGTTCCATTCAAAATA 113118 || ||| | || ||||| || | || || | | ||| || | || |||| Sbjct 3680 CTTTGGAATGATGAAATGAA-GAACAAATTAATTGCCAAC-AATGGCTCTGTGCAGAATA 3737 Query 113119 TTGTGGATATTCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGA 113178 || |||| ||||| || || ||| ||||||| || || |||||||||||| ||| Sbjct 3738 TTCTGGAAATTCCTGAGGATATTCGTGAGTTGTATAAAACCGTGTGGGAAATCAAGGTGA 3797 Query 113179 AGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGA 113238 | | ||||| ||||| || || ||||| ||||||||||||||||||| | | Sbjct 3798 AAACAATGATTGAAATGGCAGCTGACCGTGGGGCCTTCATTGATCAAAGTCAATCATTCA 3857 Query 113239 ATCTATTCATGG-AAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGG 113297 | | | | ||| | | | ||| ||| || ||| |||| || || | | ||| Sbjct 3858 ACATTTACGTGGCAGAACCTAACTATG-GGAAACTCACTTCAATTCATTTCCATGCCTGG 3916 Query 113298 AAGAAGGGTCTCAAAACGGGGATGTATTA 113326 || | ||| |||||||||||||||||||| Sbjct 3917 AAAATGGGCCTCAAAACGGGGATGTATTA 3945 >seq79 Length=216850 Score = 109 bits (120), Expect = 7e-19 Identities = 339/520 (65%), Gaps = 6/520 (1%) Strand=Plus/Minus Query 101816 TTGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTCTAAATGA 101875 |||||| | ||| || ||||| || || |||| |||| | ||||| || | || || Sbjct 76715 TTGGACAGTTGAGGAAGTAGACCTATCCCGGGATATGGATCACTGGAATGCTTTGAAGGA 76656 Query 101876 AAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATTGT 101935 |||| ||||||||| | || |||||||||||||||| | |||||||| ||||| Sbjct 76655 TTGCGAAAGGAAATTCATTAGCCACGTCCTGGCATTCTTTGCGGCATCCGATGGGATTGT 76596 Query 101936 TTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCAATCCTCTGAAGCGAGATCTTT 101995 ||||||| || | ||| | | ||||||||| | | || || ||| || Sbjct 76595 AAATGAGAATCTCGTGGAGCGCTTCAGTCAGGAGGTGCAAATCACAGAGGCACGATTCTT 76536 Query 101996 CTATGCGTATC--AATGTCATAATGAAATGGTGCATGGGGAGACATACAGTAAACTCATA 102053 ||||| | | | || ||| || | || ||| | || | |||||| ||||| Sbjct 76535 CTATGGCTTCCAGATTGCCAT--GGAGAATGTACATAGCGAAATGTACAGTTTGCTCATT 76478 Query 102054 GACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTT 102113 || | ||| || |||| |||||| | ||||| | |||||| | || | Sbjct 76477 GATACGTACATACGGGATCCGCAGGAGAAGGACTTCCTCTTCAATGCCATCGAGACGCTG 76418 Query 102114 CCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATA-CAAAGTCGCGTTC 102172 || ||| | | ||||| || |||||||| | ||||| ||| | | | | || Sbjct 76417 CCGTGTGTGAAGAAGAAGGCCGATTGGGCACTCCAGTGGATTGCCAGCCAGGAAGC-AAA 76359 Query 102173 CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTT 102232 || | || | || | || |||||| |||||||| || |||||| ||| ||| Sbjct 76358 TTTCGGCGAAAGGGTCATTGCCTTTGCGGCAGTTGAGGGGATTTTCTTCAGCGGTAGCTT 76299 Query 102233 CTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 102292 | | | || | ||||||||| || || ||||||| || ||| ||| ||| || Sbjct 76298 CGCCTCAATCTTCTGGCTCAAGTCACGCGGCATCATGCCCGGACTCACGTTCAGCAATGA 76239 Query 102293 GCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCG 102332 ||| || || || || ||||| |||||| || |||||| Sbjct 76238 GCTCATTTCACGCGATGAGGGCCTCCACTGTGACTTTGCG 76199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620652919983040