Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1176 143 6e-29 seq24 127 5e-24 >seq1176 Length=25388 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || || || || || || || ||||| |||| | || | ||||||||| Sbjct 17284 ACAAGGTGGAGTGTTGATTCCTTCTGGATGTTGTAGTCGGACAATGTACGCCCATCTTCC 17343 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || || ||||| ||||||||||||||||| ||| Sbjct 17344 AGCTGCTTCCCGGCGAAGATGAGACGCTGCTGATCTGGCGGAATGCCTTCTTTGTCCTGA 17403 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| || || ||||| ||||| || || || || || ||||| | |||||| Sbjct 17404 ATTTTAGCTTTTACATTCTCGATGGTATCTGACGGCTCAACCTCGAGGGTGATCGTCTTC 17463 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | ||||| || || | ||||| Sbjct 17464 CCTGTGAGTGTTTTCACAAAGATCTGCAT 17492 >seq24 Length=280856 Score = 127 bits (140), Expect = 5e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || || || || |||||||||||||||| || || | |||||| ||||| ||||| || Sbjct 39545 GTAGATTCCTTCTGAATATTGTAATCGGAGAGCGTACGCCCATCCTCGAGTTGCTTGCCA 39486 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 || ||||| | || || |||||||| |||||||| || ||||| || || ||| ||| Sbjct 39485 GCAAAGATCAAACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTTGCCTTC 39426 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 || |||||||| || || || || || ||||| || | ||||| || || ||||| Sbjct 39425 ACATTCTCAATCGTATCAGATGGCTCGACCTCAAGAGTGATGGTCTTACCCGTTAAAGTC 39366 Query 195124 TTTACGAACACTTGCATT 195141 || || || | |||||| Sbjct 39365 TTCACAAAGATCTGCATT 39348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109317669933044