Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq24 140 3e-28 seq1176 123 2e-23 >seq24 Length=280856 Score = 140 bits (154), Expect = 3e-28 Identities = 161/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| | |||| ||||||||| || || ||||||||||||| || || | | Sbjct 39562 ACGGAGAACGAGATGA--GGTAGATTCCTTCTGAATATTGTAATCGGAGAGCGTACGCCC 39505 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | |||||| || ||||| ||||||||||| || || || |||||||| || || Sbjct 39504 ATCCTCGAGTTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATGCCCTCCTT 39445 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 || || || ||| || ||| | || | || ||||| | || || |||||||||| Sbjct 39444 GTCCTGGATCTTTGCCTTCACATTCTCAATCGTATCAGATGGCTCGACCTCAAGAGTGAT 39385 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || |||||||| || ||||| |||||||| Sbjct 39384 GGTCTTACCCGTTAAAGTCTTCACAAAGATCTGCAT 39349 >seq1176 Length=25388 Score = 123 bits (136), Expect = 2e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || || || ||||| || || || ||||| |||| | || | |||| |||| ||| Sbjct 17290 TGGAGTGTTGATTCCTTCTGGATGTTGTAGTCGGACAATGTACGCCCATCTTCCAGCTGC 17349 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || || | |||||| ||||| ||||||||||||||||| || |||||||| Sbjct 17350 TTCCCGGCGAAGATGAGACGCTGCTGATCTGGCGGAATGCCTTCTTTGTCCTGAATTTTA 17409 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||||||| | || | || || |||| || || || || |||| ||| || || || Sbjct 17410 GCTTTTACATTCTCGATGGTATCTGACGGCTCAACCTCGAGGGTGATCGTCTTCCCTGTG 17469 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | ||||| ||||| |||||||| Sbjct 17470 AGTGTTTTCACAAAGATCTGCAT 17492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396222704556924