Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq79 168 1e-36 >seq79 Length=216850 Score = 168 bits (186), Expect = 1e-36 Identities = 482/730 (66%), Gaps = 21/730 (3%) Strand=Plus/Plus Query 47961 GATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACA 48020 |||| || ||| | || ||||| | |||||||| | |||||||| | | | | Sbjct 76030 GATCTGCCACGAATTCAATGTACTGCGACATGAGTTGGCAATTCATGCCCAGCATGTCAA 76089 Query 48021 CGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCT 48080 | || | || | |||||| || |||| ||| || ||| ||||| | | || | Sbjct 76090 CAGGAAGGGCATCTGTGAGGAATTCCTGCTCAATGGTCACAGCTTCGCGAATGATTTCGA 76149 Query 48081 TAACGCGGGACTCTGAGGGTTTGTTGCGC-AGGTGCTTGG-CAT-AGAGCATGCAGGCAA 48137 | | ||| || |||||| || | || | ||||||||| ||| ||| || |||| Sbjct 76150 TGATGCGCTCCTTTGAGGGCTTCT-GCACGAGGTGCTTGAACATTAGA-----CACGCAA 76203 Query 48138 AGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCA 48197 |||| | ||| | ||| || || || |||||| | ||| ||| ||| || |||| Sbjct 76204 AGTCACAGTGGAGGCCCTCATCGCGTGAAATGAGCTCATTGCTGAACGTGAGTCCGGGCA 76263 Query 48198 TGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCT 48257 ||| || | ||||||||||| |||| ||||| || |||||| || |||| Sbjct 76264 TGATGCCGCGTGACTTGAGCCAGAAGATTGAGGCGAAGCTACCGCTGAAGAAAATCCCCT 76323 Query 48258 CCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCT-GAGATCCAG 48316 | |||||||| || || ||| ||| || |||||| || ||| || || | ||||| Sbjct 76324 CAACTGCCGCAAAGGCAATGACCCTTTCGCCGAAATTTGC-TTCCTGGCTGGCAATCCAC 76382 Query 48317 GAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGC 48376 || ||||| || ||||||||||| | || |||| |||||| ||||| |||||| Sbjct 76383 TGGAGTGCCCAATCGGCCTTCTTCTTCACACACGGCAGCGTCTCGATGGCATTGAAGAGG 76442 Query 48377 TTCTTGCACTCACCTGCG--TCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACATCT 48431 | | || |||||| ||| | || || | |||||| | |||||| | Sbjct 76443 AAGT--CCTTCTCCTGCGGATCCCGTATGTACGTATCAATGAGCAAACT---GTACATTT 76497 Query 48432 CAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCT 48491 | || |||||||| || || |||||||| || |||||| | ||||| | | Sbjct 76498 CGCTATGTACATTCTCCATGGCAATCTGGAAGCCATAGAAGAATCGTGCCTCTGTGATTT 76557 Query 48492 GCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAA 48551 |||| || ||| | ||||| ||||||||||| || |||||||| || || |||| Sbjct 76558 GCACCTCCTGACTGAAGCGCTCCACGAGATTCTCATTTACAATCCCATCGGATGCCGCAA 76617 Query 48552 AGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCT 48611 |||| || ||||| || ||| ||| | | ||| | | | |||||||||| | Sbjct 76618 AGAATGCCAGGACGTGGCTAATGAATTTCCTTTCGCAATCCTTCAAAGCATTCCAGTGAT 76677 Query 48612 GTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGT 48671 | || | ||||| ||||| || || ||||| || || || || ||||||| Sbjct 76678 CCATATCCCGGGATAGGTCTACTTCCTCAACTGTCCAAAATGAGGCCTCGGCCTTTTTGT 76737 Query 48672 ACATGCCCCA 48681 |||| |||| Sbjct 76738 ACATCTCCCA 76747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931398519546880