Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq410 118 1e-21 >seq410 Length=118525 Score = 118 bits (130), Expect = 1e-21 Identities = 178/251 (71%), Gaps = 4/251 (2%) Strand=Plus/Minus Query 47824 TGAAGCATTAACCACATAGCCTCGACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCA 47883 || ||||| | ||||||||| || || || || ||||||| ||||| ||||| ||| | Sbjct 57349 TGCAGCATGAGCCACATAGCTTCCACGTAGTCCTTGGCATGACCCCAATCACGGCGTGAA 57290 Query 47884 TCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTTCAGAGATTGCTTTT--AATGCTC 47941 || |||||||| || | || || || || || ||||| ||| | || || Sbjct 57289 TCGAGATTTCCCAGCTCAAAGCACTCCATCTGCCCCAGGGAGAT--CTTCGCCACTGATC 57232 Query 47942 TTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAA 48001 | ||||| || || || |||||| | || ||||| | ||| ||||||||||| || || | Sbjct 57231 TGGTAATTTTGCGCGTGACAAAATTCTCCCCACGACGTGGGGATTCATGATTGAAGAGGA 57172 Query 48002 TACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTACTATCCAGTACCCAT 48061 | ||| | ||||| |||| ||||| | ||||| |||||| || ||||| | || | Sbjct 57171 TCCCATTGCAGGCGAACATCCCGTAGGCCTCACGGTAGTTCACCACAATCCAAAAGCCGT 57112 Query 48062 AGAGTTTTGCA 48072 | | |||||| Sbjct 57111 ACATCTTTGCA 57101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665398468982240