Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq2439 219 5e-52 seq2 114 2e-20 >seq2439 Length=24097 Score = 219 bits (242), Expect = 5e-52 Identities = 1123/1748 (64%), Gaps = 52/1748 (3%) Strand=Plus/Plus Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265 |||| || ||| | ||| | ||||| || | | || || |||||| | ||||||| | Sbjct 2225 GAAAGGCCCCAGCATATGCTGATGCGAGTATCTGTGGGAATTCACGGGAATGACATTGCT 2284 Query 75266 TCTGTCTTGGAGACATACGACAAGATGTCCCAA-GGTATGTTCATTCACGCAACACCAAC 75324 | | | | ||||| ||| || | || ||| ||||| |||| |||||| ||||||| Sbjct 2285 GCAGCCATTGAGACGTACAACCTTCTATCACAACGGTAT-TTCACGCACGCATCACCAAC 2343 Query 75325 CCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAA 75384 ||||| |||| || ||| || ||| | || ||| ||||| | ||| Sbjct 2344 ACTCTTTGCAGCTGCCACTCCAGTGCCTCAGCTATCGTCTTGTTTCCTCCTGTCCATGGC 2403 Query 75385 GGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTG 75444 || ||| || | |||||||| | || || | | || || | ||||||||||| Sbjct 2404 TGATGACAGTATTGATGGTATCTACGATACACTGAAACAATGCGCTCTAATCTCAAAGTC 2463 Query 75445 GGCTGGGGGTATTGGGATGCACATCCA-TG-ATGTGAGAGCCAATAAATCTCGTATTCGG 75502 || || || ||||| | | | || || || ||| | | || | ||| Sbjct 2464 TGCAGGAGGGATTGGTGTTAATACTCACTGCATTCGAGCTCGTGGTAGTCAC--ATTGCT 2521 Query 75503 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 75562 || || ||||| ||| |||| | | || ||||||||||| | ||| | || || Sbjct 2522 GGAACCAATGGCACATCGAATGGACTCGTACCGATGCTTCGCGTCTACAACACTACTGCC 2581 Query 75563 CGCTATGTAAATCAAGCGGGGCGT---CGCAAGGGGTCCATCGCGGTCTACTTGGAACCA 75619 |||| || |||||| ||| | ||| || || | || | ||| | ||||| Sbjct 2582 TGCTACGTTGATCAAGGTGGGAATAAGCGCCCAGGTGCCTTTGCAATATACCTTGAACCC 2641 Query 75620 TGGCATGCCGATATCATGGAGTTCCTTGA-GTTACGACTCA-ACCAAGGTGACGAAGAGG 75677 ||||||| |||||| | || ||||| || ||| | | ||| ||| | ||| ||| Sbjct 2642 TGGCATGGGGATATCTTTGAATTCCTAGACCTTAAAAAGAATACC--GGTAAGGAAAAGG 2699 Query 75678 CTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTG 75737 | || |||||||||| | | || |||||||| || | || ||| |||| || Sbjct 2700 CACGAGCACGAGATCTCTTCTATGCGCTCTGGATTCCTGATTTATTTATGCAGCGTGTCT 2759 Query 75738 AGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGA-CGCG 75796 |||| |||| ||||| ||| | || || ||||| || || | | || || Sbjct 2760 CCGAGGATGGTGAATGGAGTCTCATGTGCCCTAACAAGTGCCCTGGATTGTTTGATTGCT 2819 Query 75797 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCG 75856 | |||||| || ||| | | ||||||||||| |||| || ||| || || || Sbjct 2820 G-GGGTGAAGAATTTAATAAATTGTACACAAAGTACGAAGCAGAAGGT-CAGTACATTCG 2877 Query 75857 -ACTGTACCAGCCGCCGATGTTTGGAAGGCTAT-TCTCAAA-TCACAGACGGAGACTGGA 75913 | |||||||| ||| ||||| || || ||||| ||| || || || ||| Sbjct 2878 TAAGGTACCAGCTCGAGATCTTTGGTTTGCCATCATTCAAAGTCA-AG-TAGAAACGGGA 2935 Query 75914 ACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGA 75973 || || |||||||| |||||||| || |||||| |||||||| || ||||| | || Sbjct 2936 ACGCCGTATATGCTGTACAAGGACGCATGTAACCGTAAGAGTAATCAGCAGAATATTGGT 2995 Query 75974 ACAAT---CAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAG 76030 ||||| | ||| || || ||||| || || | || || | ||||||||| Sbjct 2996 ACAATTCGCTGTAGC---AACCTCTGCACCGAGATCGTTGAATATTCGTCCAAGGATGAG 3052 Query 76031 ACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGC 76090 | ||||| |||||||| |||||||| || ||| | || ||| | || || | Sbjct 3053 ATTGCTGTGTGCAATTTAGCATCAATTGCACTTAATATGTTTGT-ACTG-CCCGA-TAAG 3109 Query 76091 ACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGA 76150 || | ||||| ||| || || | |||| |||||||| || ||||| ||| | Sbjct 3110 ACGTATGATTTTGAGAAGCTAAAGTCCGTCACGAAGATTGTCACACGCAATCTCAACAAA 3169 Query 76151 GTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAG---TCTAATATGCGACAC 76207 || || |||| || | || ||||| | | || |||| || |||||||||||| Sbjct 3170 GTTATAGACATCAACTACTACCCCGT--ACCCGAAGC-AAAGCGCTCCAATATGCGACAC 3226 Query 76208 AGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCA 76267 ||||| ||||| | || ||||||||||| ||||||| | ||| | ||| | || Sbjct 3227 AGACCGATTGGAATTGGAGTTCAAGGTCTAGCGGATGCTTACATTCTCATGCGCCTCCCA 3286 Query 76268 TTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCA 76327 | |||| | ||||||||| | | || | |||||||||||||| || | | | Sbjct 3287 TATGATAGCAAAGAAGCCAAGAAACTCAACCAACAAATCTTTGAAACCATTTACTATGGA 3346 Query 76328 TCCCTGGAGGCGAGTTGTGAATTGGCT--GAAGCCCAAGGTTCCTATGAGACATTTGAGG 76385 | || ||||| |||||||| | ||| ||||| | || | |||||||| | | | Sbjct 3347 GCTCTTGAGGCTAGTTGTGAGCTCGCTGAGAAGCTC--GGACCATATGAGACGTACAATG 3404 Query 76386 GTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCA 76445 | ||| | | | || | || |||| ||||||||| | |||| | | | | Sbjct 3405 GAAGTCCAGTAAGCAAGGGAATTCTGCAGTACGATATGTGG--AATAGAAAGCCAACGGA 3462 Query 76446 ACTACG--ACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCT 76503 || | | ||||||| | |||| | || || | ||| |||| || || Sbjct 3463 TCTTTGGAATTGGGATGAATTGAAGGCAAAGATTGCTCAGCATGGTGTTCGAAATTCCCT 3522 Query 76504 TTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 76563 | |||| ||||||||||| || || || || ||||| | || |||||||||| ||| Sbjct 3523 GCTTGTGGCTCCAATGCCAACGGCTTCTACGGCTCAAATTCTTGGCAATAATGAATCCTT 3582 Query 76564 TGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGT 76623 ||||| |||||| | || || ||| | | || | || || || | || Sbjct 3583 CGAACCCTACACATCCAATATGTACACCCGTCGTGTTCTTTCTGGGGAATTCCAAGTGGT 3642 Query 76624 CAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGA 76683 |||| || || | || || ||| | | | || ||| | || ||||| || Sbjct 3643 TAACAGCCATCTGTTAAAGGATCTCTCTGAACTACGCCTTTGGAATGATGAAATGAA-GA 3701 Query 76684 TCTCAT--GGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATA-T 76740 | || || | | ||| || | || ||||| || || || || |||| | Sbjct 3702 ACAAATTAATTGCCAAC-AATGGCTCTGTGCAGAATATTCTGGAAATTCCTGAGGATATT 3760 Query 76741 CAAGAATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGC 76800 | || | | || || ||||||||||||||| ||||| | ||||| ||||| || Sbjct 3761 CGTGAGT-TGTATAAAACCGTGTGGGAAATCAAGGTGAAAACAATGATTGAAATGGCAGC 3819 Query 76801 AGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGG-AAAGTCCAA 76859 || ||||| ||||||||||||||||||| | || | | | ||| | | | || Sbjct 3820 TGACCGTGGGGCCTTCATTGATCAAAGTCAATCATTCAACATTTACGTGGCAGAACCTAA 3879 Query 76860 CGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAA 76919 | ||| || ||| |||| || ||| | | || |||||| ||| |||||||| || | Sbjct 3880 CTATG-GGAAACTCACTTCAATTCATTTCCATGCCTGGAAAATGGGCCTCAAAACGGGGA 3938 Query 76920 TGTACTAT 76927 |||| ||| Sbjct 3939 TGTATTAT 3946 >seq2 Length=704064 Score = 114 bits (126), Expect = 2e-20 Identities = 321/485 (66%), Gaps = 27/485 (6%) Strand=Plus/Minus Query 175215 CAAAGAT-GAACTTGAAGAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAA 175273 ||||||| ||| || || ||||| |||| |||||| | || || || ||| Sbjct 342098 CAAAGATTGAAATTATGGAATTTGTGAATTTCCTCAAGAATCCGCAGCAGTACATTGATT 342039 Query 175274 GTGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCC 175333 || || ||||| ||| ||| || | || ||||| || |||||||| ||||| | Sbjct 342038 TGGGGGCGAAGATTCCCAAAGGGGCAATGCTAACGGGTCCACCGGGTACGGGGAAGACTC 341979 Query 175334 TCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATC-CAGTGCTCTGCCGCA 175392 |||| ||| || | || ||||| | ||||| || || ||| ||||| || | | Sbjct 341978 TCCTGGCCAAGGCAACAGCCGGTGAGGCGAATGTGCCCTTTATCACAGTG-TCCGGATCG 341920 Query 175393 AACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATC 175452 | ||| | || ||||||||||| || || | |||||| || ||| | || | || Sbjct 341919 GAATTTCTCGAAATGTTTGTTGGCGTAGGGCCGTCAAGGGTGCGAGATATGTTCGCCATG 341860 Query 175453 GCCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGG---GCAAG 175509 ||||| || || || |||||| | |||||||| || || || || |||| ||||| Sbjct 341859 GCCCGGAAACATGCTCCGTGTATTCTTTTCATTGACGAAATCGACGCTGTGGGGCGCAAG 341800 Query 175510 CAA----CGCAGCGCT--GGTGGTATGCCAGCAAATGACGAGAGAGAACAAACAATTAAT 175563 | | || ||| ||||| || || | | |||| | || | ||| Sbjct 341799 AGAGGTGGGAAGAGCTTCGGTGG---GCATTCAGAGCAGGAGA------ATACGCTCAAT 341749 Query 175564 CAACTACTCACCGAGATGGATGGCTTTGACAATGAGACTGGCA---TTGTGGTTATTGCG 175620 || || || |||||||||||||| |||| ||| | | || ||| | ||| Sbjct 341748 CAGCTGCTTGTTGAGATGGATGGCTT---CAATACGACCACAAATGTCGTCGTTTTGGCG 341692 Query 175621 GCCACTAATCGCGTGGATATCCTTGATGACGCCCTCCTTCGCCCGGGTCGTTTTGATCGC 175680 || || ||||||||||||||||| ||| | ||||| || || ||||| || |||||| | Sbjct 341691 GCAACGAATCGCGTGGATATCCTCGATAAGGCCCTGCTGCGTCCGGGACGCTTTGATAGG 341632 Query 175681 AAGAT 175685 |||| Sbjct 341631 CAGAT 341627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596483604492160