Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq2 114 4e-20 seq485 111 5e-19 seq2439 105 2e-17 seq334 95.1 4e-14 >seq2 Length=704064 Score = 114 bits (126), Expect = 4e-20 Identities = 218/316 (69%), Gaps = 4/316 (1%) Strand=Plus/Plus Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089 || ||||| || |||||||||||||||| | |||||||| || || | || || || Sbjct 341807 CCCACAGCGTCGATTTCGTCAATGAAAAGAATACACGGAGCATGTTTCCGGGCCATGGCG 341866 Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149 || | |||| || | || | || | |||||| ||||||| | |||||| || || Sbjct 341867 AACATATCTCGCACCCTTGACGGCCCTACGCCAACAAACATTTCGAGAAATTCCGATCCG 341926 Query 289150 GATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTA 289209 || ||| || || | ||||| || || || ||| |||| | ||||| || ||||| Sbjct 341927 GACACTGTGATAAAGGGCACATTCGCCTCACCGGCTGTTGCCTTGGCCAGGAGAGTCTTC 341986 Query 289210 CCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACT-TTTGCCCCAGCAGACTT 289268 || || || ||||| ||| || | | |||||||| | | || ||||| | | Sbjct 341987 CCCGTACCCGGTGGACCCGTTAGCATTGC-CCCTTTGGGAATCTTCGCCCCCAAATCAAT 342045 Query 289269 ATATTTCTCAGGGCTCTTTA-AAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCAT 289327 || | || || |||| | |||||| |||| |||| || |||| |||||||| | Sbjct 342046 GTACTGCTGCGGATTCTTGAGGAAATTC-ACAAATTCCATAATTTCAATCTTTGCCTCCT 342104 Query 289328 CACATCCTGCTACATC 289343 ||||||| || ||||| Sbjct 342105 CACATCCAGCCACATC 342120 >seq485 Length=198357 Score = 111 bits (122), Expect = 5e-19 Identities = 186/269 (69%), Gaps = 0/269 (0%) Strand=Plus/Plus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| ||| || | |||||| ||||| || |||||| | ||| ||||| |||||| Sbjct 134138 TCCATAGCCTTTATGAGACGACGTTGAATGTAGCCAGTTTCGGCTGTCTTTACGGCTGTA 134197 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCC 302694 ||||| | ||| ||||||| |||||||| ||||| | | || |||| ||| || Sbjct 134198 TCAATCAAACCCTCACGACCTCCCATAGCGTGGAAATAGAATTCAGACGGTGTTAGACCA 134257 Query 302695 CCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAG 302754 ||| |||| |||||||||||||||| | || || | |||| || | || Sbjct 134258 GCAAGGTAGGAATTCTCAACGAAACCACGAGATTCCGGACCGTAGTCGTCTTTAATGAAA 134317 Query 302755 TGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGT 302814 || || ||||| | || |||| | ||||| || || || |||||||| || || Sbjct 134318 TGCGGTAGGGTACGCTTACGGAAGCCAAAGGGGATTCGTTTACCCTCAACGTTTTGTTGA 134377 Query 302815 CCCAGGCACGAAATCATCTGCGAAATATT 302843 |||| || | || | || |||||||| Sbjct 134378 CCCACACAAGCGATAACTTGGGAAATATT 134406 >seq2439 Length=24097 Score = 105 bits (116), Expect = 2e-17 Identities = 501/785 (64%), Gaps = 17/785 (2%) Strand=Plus/Minus Query 155570 TACAAACATACCAAGACCAATAGACGCCAGATTACATACCGCAGTCTC---CTTGTCGTC 155626 |||||||||| ||| |||| || || | ||| || || ||| |||| |||| | | Sbjct 3097 TACAAACATATTAAGTGCAATTGATGCTAAATTGCACACAGCAATCTCATCCTTG--GAC 3040 Query 155627 GCTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTG 155686 | ||||| || ||||| ||| ||||| || || || || | ||||| ||| Sbjct 3039 GAA-TATTCAACGATCTCGGTGCAGAGGTTGCTACAGCGAATTGTACCAATATTCTGCTG 2981 Query 155687 GTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTG 155746 ||| |||| |||||| || |||||||| || || || || ||||| || || | || Sbjct 2980 ATTACTCTTACGGTTACATGCGTCCTTGTACAGCATATACGGCGTTCCCGTTTCTACTTG 2921 Query 155747 TGCGTCCAGAATCTTTAGCCAGAGGTCACGGGCAT-TAATTTGCTTGTTGTATCTG-CCT 155804 | | || | ||| || || || || || || | | ||| ||| ||| Sbjct 2920 ACTTTGAATGATGGCAAACCAAAGATCTCGAGCTGGTACCTTACGAAT-GTA-CTGACCT 2863 Query 155805 TCCGACTCATATTTCATATACAGCGTTCGGTAA--TCCTCACCGTAACAATCACTCAGTC 155862 || | || || || | |||| || ||| || ||||| | |||||| || || Sbjct 2862 TCTGCTTCGTACTTTGTGTACAA--TTTATTAAATTCTTCACCCCAGCAATCAAACAATC 2805 Query 155863 CAGGGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAA 155922 |||||||||| | ||||| | || ||| || || ||||||| ||||| Sbjct 2804 CAGGGCACTTGTTAGGGCACATGAGACTCCATTCACCATCCTCGGAGACACGCTGCATAA 2745 Query 155923 ATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGT 155982 ||| |||| ||| | |||||||| || || | ||| || || || | ||| Sbjct 2744 ATAAATCAGGAATCCAGAGCGCATAGAAGAGATCTCGTGCTCGTGCCTTTTCCTTACCGG 2685 Query 155983 GATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAG 156042 |||||| || |||| |||||| ||||| ||| || || || || || | Sbjct 2684 TATTCTTTTTAAGGTCTAGGAATTCAAAGATATCCCCATGCCAGGGTTCAAGGTATATTG 2625 Query 156043 CAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGA 156099 |||| ||| | ||| ||||| ||||| || || | ||||| | ||| ||| Sbjct 2624 CAAAGGCACCTGGGCGCTTATTCCCACCTTGATCAACGTAGCAGGCAGTAGTGTTGTAGA 2565 Query 156100 CACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAG 156159 | | ||||| || | | ||||| || |||||||||||||| ||| || |||| Sbjct 2564 CGCGAAGCATCGGTACGAGTCCATTCGATGTGCCATTGGTTCCAGCAATGTGACTACCAC 2505 Query 156160 ATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGC 156219 | |||| ||| ||| | ||||| || |||| | || || ||| |||||| Sbjct 2504 GAGCTCGAATGCAGTGAGTATTAACACCAATCCCTCCTGCAGACTTTGAGATTAGAGCGC 2445 Query 156220 ATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGC 156279 ||| || | |||| | | ||||| |||||| ||||| |||| || || || | | Sbjct 2444 ATTGTTTCAGTGTATCGTAGATACCATCAATACTGTCATCAGCCATGGACAGGAGGAAAC 2385 Query 156280 ACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAA 156339 | || || ||||| ||| || |||| || ||||| |||| ||| || | | Sbjct 2384 AAGACGATAGCTGAGGCACTGGAGTGGCAGCTGCAAAGAGTGTTGGTGATGCGTGCGTGA 2325 Query 156340 AATAC 156344 ||||| Sbjct 2324 AATAC 2320 >seq334 Length=136801 Score = 95.1 bits (104), Expect = 4e-14 Identities = 107/141 (76%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 252550 TTTGTAACATACATACCAAGCGCCTGCTTTCCCATAGCACTCTGGTAAGTATTTCTGGGA 252609 || |||| || | ||| | || ||||| ||||||||||||||||| ||||| | |||| Sbjct 115858 TTGGTAATGTAGACACCCATAGCTTGCTTCCCCATAGCACTCTGGTAGGTATTACGGGGA 115917 Query 252610 GACTGATTGTTTTCCGGGAAAGGAATGCATGATGCTACAACACCGAAGAT-AGTGCTTGG 252668 |||||||| |||||||| |||||| ||| || |||||| | || | ||| || Sbjct 115918 CTCTGATTGTGATCCGGGAATGGAATGATTGAGGCACAAACACCAAGAATCATTGC-CGG 115976 Query 252669 GTGAATTTCACAGTGACTGTA 252689 |||||||||||||| |||| Sbjct 115977 ATGAATTTCACAGTGCGTGTA 115997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471600133430284