Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2439 327 1e-84 seq1176 123 2e-23 seq825 122 8e-23 seq24 102 7e-17 >seq2439 Length=24097 Score = 327 bits (362), Expect = 1e-84 Identities = 1204/1864 (65%), Gaps = 45/1864 (2%) Strand=Plus/Minus Query 138152 ATTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTC 138211 ||||||| |||||||| | ||||||| || |||||||| || | || ||||||||| | Sbjct 3995 ATTTATCCACAGTAAATTGGATGGCATTGGCAGCTGGTTTAGTGCGCAAATAATACATCC 3936 Query 138212 CCGTTTTTAA-CCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTC 138270 ||||||| | |||||||||| |||| | | || || ||||||||| | | || | Sbjct 3935 CCGTTTTGAGGCCCATTTTCC-AGGCATGGAAATGAATTGAAGTGAGTTTCCCATAGTTA 3877 Query 138271 GGTTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATG 138330 |||| |||| | ||||| || |||||||| ||||| ||||| || || || ||| Sbjct 3876 GGTTCTGCCACGTAAATGTTGAATGATTGACTTTGATCAATGAAGGCCCCACGGTCAGCT 3817 Query 138331 GCCATGTTAATTAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATA 138390 ||||| | ||| | |||| || || ||||||||||| || || | ||||||||| Sbjct 3816 GCCATTTCAATCATTGTTTTCACCTTGATTTCCCACACGGTTTTATACAACTCACGAATA 3757 Query 138391 TGTCGCGGTATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTTCTC 138450 | || ||| |||||| || | || ||| ||||| | || || Sbjct 3756 TCCTCAGGAATTTCCAGAATATTCTGCACAGAGCCATTGTTGGCAATTAATTTGTTCTTC 3697 Query 138451 ATGTCATCGTTGTACAGATTCAACTTGATCAAG-TCGTTTATCAGATATCTGTTTATGAC 138509 || ||||| || | || | || | || || |||| ||||| ||||| | || Sbjct 3696 ATTTCATCATTCCAAAGGCGTAG-TTCAGAGAGATCCTTTAACAGATGGCTGTTAACCAC 3638 Query 138510 CTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGA 138569 || ||||| || | | || ||||| ||| || ||| ||| | || || || || Sbjct 3637 TTGGAATTCCCCAGAAAGAACACGACGGGTGTACATATTGGATGTGTAGGGTTCGAAGGA 3578 Query 138570 TTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGA 138629 ||| || || || ||||| |||||||| | || || ||||| ||||| | || || Sbjct 3577 TTCATTATTGCCAAGAATTTGAGCCGTAGAAGCCGTTGGCATTGGAGCCACAAGCAGGGA 3518 Query 138630 ATTCCGTAAACCGTGA--AGCTTGATTCGTT-CCTTGAGCGACGACCAGTCCCACAAATC 138686 ||| || | ||| || ||| | || || |||| | ||| | ||| | ||| Sbjct 3517 ATTTCGAACACCATGCTGAGC---AATCTTTGCCTTCAATTCATCCCAATTCCAAAGATC 3461 Query 138687 GCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTC 138746 | || ||| | ||||||||||||||||| | |||||| ||| | ||||| || | Sbjct 3460 CGTTGGCTTTCTATTCCACATATCGTACTGCAGAATTCCCTTGCTTACTGGACTTCCATT 3401 Query 138747 GTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCATA 138806 ||||| || ||| || | || | || | ||| || ||||| || || ||||| Sbjct 3400 GTACGTCTCATATGGTCCGAGCTTCTCAGCGAGCTCACAACTAGCCTCAAGAGCTCCATA 3341 Query 138807 GTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCAT 138866 |||||| ||||| || || || ||||| ||| || ||| || || || | Sbjct 3340 GTAAATGGTTTCAAAGATTTGTTGGTTGAGTTTCTTGGCTTCTTTGCTATCATATGGGAG 3281 Query 138867 GCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCG 138926 ||| | | || | || || || || ||||| || || | ||| | || | || || Sbjct 3280 GCGCATGAGAATGTAAGCATCCGCTAGACCTTGAACTCCAATTCCAATCGGTCTGTGTCG 3221 Query 138927 CAGATTTGA-CGCTTT--TGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTTGTT 138983 || ||| || |||||| | ||| | || || || ||||| | || || | |||||| Sbjct 3220 CATATTGGAGCGCTTTGCTTCGGGTACG---GGGTAGTAGTTGATGTCTATAACTTTGTT 3164 Query 138984 TAAATTTCGCACGACCACCTTAGT--CGTATGCTTTAATCGTTCAAAATCGTATGTGCCC 139041 | ||| || ||| | ||| || || | ||||| |||||||| || || Sbjct 3163 GAGATTGCGTGTGACAATCTTCGTGACGGA--CTTTAGCTTCTCAAAATCATACGTC--- 3109 Query 139042 CCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACC 139101 || ||| | || ||||| | || | ||| || |||| |||||||| Sbjct 3108 ---TTATCGGGCA----GT--ACAAACATATTAAGTGCAATTGATGCTAAATTGCACACA 3058 Query 139102 GCCACTTCGTCGG-GGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGAT 139160 || | || || || || ||||| || || |||| || | || ||||| || Sbjct 3057 GCAATCTCATCCTTGGACGAA-TATTCAACGATCTCGGTGCAGAGGTTGCTACAGCGAAT 2999 Query 139161 CGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGG 139220 ||||| | ||| || ||||| || || |||||||| || || ||||| ||||||||||| Sbjct 2998 TGTACCAATATTCTGCTGATTACTCTTACGGTTACATGCGTCCTTGTACAGCATATACGG 2939 Query 139221 TGTGCCAGTTTCCACTTGTGTCTCTATAATG--AATTTGAACAAGTCCCTAGCTTGTATT 139278 || || ||||| ||||| | | || ||| || || | || | |||| ||| Sbjct 2938 CGTTCCCGTTTCTACTTGACTTTGAATGATGGCAAACCAAAGA--TCTCGAGCTGGTACC 2881 Query 139279 TGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCG 139338 | ||| | ||| | | || ||||||||| ||| | || | ||| |||||| Sbjct 2880 TTACGAATGTACTGACCTTCTGCTTCGTACTTTGTGTACAATTTATTAAATTCTTCACCC 2821 Query 139339 TAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCC 139398 || ||| | | | | ||||||| ||| |||||||| |||| | || | | | Sbjct 2820 CAGCAATCAAACAATCCAGGGCACTTGTTAGGGCACATGAGACTCCATTCACCATCCTCG 2761 Query 139399 TTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTC 139458 ||| ||| ||| || | ||| |||||||| | || | | | ||| || || || Sbjct 2760 GAGACACGCTGCATAAATAAATCAGGAATCCAGAGCGCATAGAAGAGATCTCGTGC--TC 2703 Query 139459 TTATCTT--CCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCC 139516 | ||| || ||| | || ||| | || ||||| ||||| | || | |||| Sbjct 2702 GTGCCTTTTCCTTACCGGTATTCTTTTTAAGGTCTAGGAATTCAAAGATATCCCCATGCC 2643 Query 139517 ATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTGATCGACGTGTC 139573 | ||||| || || || || | || ||| || || ||||||||||| |||| | Sbjct 2642 AGGGTTCAAGGTATATTGCAAAGGCACCTGGGCGCTTATTCCCACCTTGATCAACGTAGC 2583 Query 139574 GTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGC 139633 ||| | | ||| | ||||| | |||||| | || || ||| ||| || ||||| | Sbjct 2582 AGGCAGTAGTGTTGTAGACGCGAAGCATCGGTACGAGTCCATTCGATGTGCCATTGGTTC 2523 Query 139634 TACGGATGGGACTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAA 139693 | ||| |||| |||||||| | | || ||| | || || || || || Sbjct 2522 CAGCAATGTGACTACCACGAGCTCGAATGCAGTGAGTATTAACACCAATCCCTCCTGCAG 2463 Query 139694 ATTTGGATATTAAAACGCAATCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCT 139753 | || || |||| | |||| | | ||| ||||| ||||| || ||||| || Sbjct 2462 ACTTTGAGATTAGAGCGCATTGTTTCAGTGTATCGTAGATACCATCAATACTGTCATCAG 2403 Query 139754 GCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAG 139813 ||| | | || || || ||||| || || || | | ||| | |||||||| || | Sbjct 2402 CCATGGACAGGAGGAAACAAGACGATAGCTGAGGCACTGGAGTGGCAGCTGCAAAGAGTG 2343 Query 139814 TAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCA 139873 | || ||||||||||| ||| || | | | |||||| || ||||| Sbjct 2342 TTGGTGATGCGTGCGTGAAATACCGTTGTGATAGAAGGTTGTACGTCTCAATGGCTGCAG 2283 Query 139874 CAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGG 139933 |||| || | ||||| || || ||||| ||||||||||||||||| ||| || ||| | Sbjct 2282 CAATGTCATTCCCGTGAATTCCCACAGATACTCGCATCAGCATATGCTGGGGCCTTTCAG 2223 Query 139934 CCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGGGTCTTGTAGCCAAAGTACC 139993 | | || |||| || | | ||| |||| || |||||| ||||||| || | Sbjct 2222 CGATTTTCCCGCCGATCTTCATTAAATATGATCTCTCGAGTGTCTTGAAGCCAAAATAGC 2163 Query 139994 TATA 139997 | || Sbjct 2162 TGTA 2159 >seq1176 Length=25388 Score = 123 bits (136), Expect = 2e-23 Identities = 154/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | ||||| || || || || || || || ||||| || || | | Sbjct 17493 GATGCAGATCTTTGTGAAAACACTCACAGGGAAGACGATCACCCTCGAGGTTGAGCCGTC 17434 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || | |||||| || || || ||||||||||| || || || ||||| Sbjct 17433 AGATACCATCGAGAATGTAAAAGCTAAAATTCAGGACAAAGAAGGCATTCCGCCAGATCA 17374 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| | ||||| |||||||| |||||||| ||| | | | |||| || || || Sbjct 17373 GCAGCGTCTCATCTTCGCCGGGAAGCAGCTGGAAGATGGGCGTACATTGTCCGACTACAA 17314 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||| || |||||||| ||||| ||| | ||| Sbjct 17313 CATCCAGAAGGAATCAACACTCCACCTTGTG 17283 >seq825 Length=38805 Score = 122 bits (134), Expect = 8e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | ||||| || || || || || || || || || || ||| || | Sbjct 12096 ATGCAGATTTTCGTGAAAACTCTCACGGGGAAGACCATCACCCTTGAGGTCGAACCCTCG 12037 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | |||| || || || || || || ||||| ||||| ||||| ||||| Sbjct 12036 GATACAATTGAAAATGTCAAGGCGAAAATTCAGGATAAAGAGGGAATCCCTCCGGATCAG 11977 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | |||||||||||||| ||||| |||||| | | | | | || || || ||| Sbjct 11976 CAGCGTCTCATCTTTGCCGGGAAGCAGCTAGAGGATGGGCGCACCCTCTCCGACTACAAC 11917 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || ||||| || || || || |||||| |||| Sbjct 11916 ATCCAGAAGGAGTCCACCCTCCATTTGGTGCTGCG 11882 >seq24 Length=280856 Score = 102 bits (112), Expect = 7e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA-C 24762 |||||||||||| | || || |||| ||||| || || || || || || | ||||| | Sbjct 39349 ATGCAGATCTTTGTGAAGACTTTAACGGGTAAGACCATCACTCTTGAGGTCG-AGCCATC 39407 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || | || || ||||||||| ||||| || || || || || || || Sbjct 39408 TGATACGATTGAGAATGTGAAGGCAAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCA 39467 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || |||||||||||||| || || || || |||||| | | | | || ||||| || Sbjct 39468 GCAGCGTTTGATCTTTGCTGGCAAGCAACTCGAGGATGGGCGTACGCTCTCCGATTACAA 39527 Query 24883 CATTCAAAAGGAATCGAC 24900 ||||| |||||||| || Sbjct 39528 TATTCAGAAGGAATCTAC 39545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449832747260960