Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq637 201 9e-47 >seq637 Length=68323 Score = 201 bits (222), Expect = 9e-47 Identities = 314/447 (70%), Gaps = 4/447 (1%) Strand=Plus/Minus Query 34203 CGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATA 34262 ||| || || |||| ||| | ||||| | |||||| | | || | || || | Sbjct 31825 CGGTGGATTCTTCAAGATGTACGTGTTCACCTTATGATTCACCTCAAGTGGCCCATGGAA 31766 Query 34263 ACCGCATGCTTTGCAGCCCTGACAGATAATGTTC--TTTTTAGCGGACACGATGAGCTCA 34320 ||| ||||| || || || ||| | || ||||| || || | ||| |||| | || Sbjct 31765 ACCACATGCCTTACATCCTTGAGAAAT--TGTTCCCTTCTTCGTGGATACGAGCAATTCC 31708 Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGG 34380 || ||||| ||||||||| ||||||| | ||| |||| ||||| || ||||| || || Sbjct 31707 GTTTCCGGATTGTCACATCCCGGACATAGGACATACTTCCGGATAAATCCATCGAGTAGA 31648 Query 34381 TCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCG 34440 || || || || | | || || || || ||||||||||| ||||| || |||| ||| Sbjct 31647 TCTTGCAATTTTGCCGCATCATGAGACCCATTGACGATGAAACGTTCATTCTTGTGATCA 31588 Query 34441 ACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGT 34500 |||||| || || |||| ||||| || |||||||| || || || || || ||||| Sbjct 31587 TACTGCGTCTGAGCACCCAATTCGCATCCAAAGTACTTGGTTGGATACATTGCTGGACGC 31528 Query 34501 CCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTT 34560 || || || || || | || | ||| || || || || ||||| || || || |||||| Sbjct 31527 CCCAGTGCTTTTGCCACCTCAGCCATATTCACAATCACCGTCTTTATCCCATTTCCCTTT 31468 Query 34561 CCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTG 34620 || || ||||| || || || ||||| |||||||||| | | || | || ||| Sbjct 31467 CCCTCCACCTTTGCATTAATCCGTGGCATCCGGTAGCGGTAGTAGTCATCGGTGACTTTG 31408 Query 34621 CGGTTAACGTTCACAGTCCCCATCGTG 34647 || ||||| || ||||| ||||| || Sbjct 31407 CGATTAACATTGACAGTAGCCATCTTG 31381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412783576661276