Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1427 149 1e-29 seq1131 138 2e-26 seq1083 138 2e-26 seq42 123 4e-22 seq539 120 5e-21 seq183 120 5e-21 seq4942 111 2e-18 seq1063 111 2e-18 seq79 105 1e-16 >seq1427 Length=44374 Score = 149 bits (164), Expect = 1e-29 Identities = 148/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 2035566 GACAAGCGCACCGACGACATTTCGCCGTGGGACAAGGCCTTTTGCGAGGTCGACCAACCC 2035625 || |||||||| || || || || |||||||| || ||| | | || ||||| | Sbjct 6098 GAGAAGCGCACAGATGATATCTCCTCGTGGGACGCGGACTTCCTCAAAGTTGACCAGGGC 6039 Query 2035626 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTG 2035685 || |||||||| | || || ||||||||||| ||||||||||| |||||||||| | Sbjct 6038 ACGCTCTTTGAACTCATTCTGGCCGCCAACTATCTCGACATCAAAGGCCTCCTCGATGTA 5979 Query 2035686 GGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACC 2035745 ||||||||| ||||||||| | || ||||| ||| |||| ||||| || |||||||| Sbjct 5978 ACGTGCAAGACTGTGGCCAACATGATTAAGGGAAAGACGCCAGAGGAGATTCGCAAGACG 5919 Query 2035746 TTTAACATCAAG 2035757 || ||||||||| Sbjct 5918 TTCAACATCAAG 5907 >seq1131 Length=77803 Score = 138 bits (152), Expect = 2e-26 Identities = 175/241 (73%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||| ||||||||||| || ||||| ||||||||| |||||| ||| ||| ||| Sbjct 15550 TGTACTTCGTGACGGCCTTTGTGCCCTCACTCACGGCGTGCTTGGCCAATTCTCCGGGCA 15491 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || ||||| || |||||||| ||||| | ||| ||| ||||||||| | Sbjct 15490 GGAGGAGACGCACTGCCGTCTGGATTTCGCGACTCGTGATGGTGGAGCGCTTGTTGTAGT 15431 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||| ||| ||| || | |||| || || | || || || ||||| ||||| Sbjct 15430 GCGCCAAACGGGAGGCTTCCGCAGCGATACGCTCAAAAATATCATTCACAAAGCTGTTCA 15371 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | |||| || ||| || |||||| || |||||||| ||||| |||| Sbjct 15370 TGATACTCATGGCTTTGCTGCTGATCCCAGTGTCGGGATGGACCTGCTTCAGCACTTTGT 15311 Query 1485710 A 1485710 | Sbjct 15310 A 15310 Score = 132 bits (146), Expect = 8e-25 Identities = 174/241 (72%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||| ||||||||||| || ||||| ||||||||| |||||| ||| ||| ||| Sbjct 9281 TGTACTTCGTGACGGCCTTTGTGCCCTCACTCACGGCGTGCTTGGCCAATTCTCCGGGCA 9340 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || ||||| || |||||||| ||||| | ||| ||| ||||||||| | Sbjct 9341 GGAGGAGACGCACTGCCGTCTGGATTTCGCGACTCGTGATGGTGGAGCGCTTGTTGTAGT 9400 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||| ||| ||| || | |||| || || | || || || ||||| ||||| Sbjct 9401 GCGCCAAACGGGAGGCTTCTGCAGCGATACGCTCAAAAATATCATTCACAAAGCTGTTCA 9460 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | |||| || ||| || ||| || || |||||||| ||||| |||| Sbjct 9461 TGATACTCATGGCTTTGCTGCTGATCCCAGTGTCTGGATGGACCTGCTTCAGCACTTTGT 9520 Query 1485710 A 1485710 | Sbjct 9521 A 9521 >seq1083 Length=50565 Score = 138 bits (152), Expect = 2e-26 Identities = 175/241 (73%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||| || || ||||| ||||||||| |||||| ||| ||| ||| Sbjct 78 TGTACTTGGTGACGGCTTTTGTGCCCTCACTCACGGCGTGCTTGGCCAATTCTCCGGGCA 137 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || ||||| || |||||||| ||||| | ||| ||| ||||||||| | Sbjct 138 GGAGGAGACGCACAGCCGTCTGGATTTCGCGACTCGTGATGGTGGAGCGCTTGTTGTAGT 197 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||| ||| || || | ||||||| || | || || || ||||| ||||| Sbjct 198 GCGCCAAGCGAGAAGCTTCCGCAGCGATGCGCTCAAAAATATCATTCACAAAGCTGTTCA 257 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | |||| || ||| || |||||| || |||||||| ||||| |||| Sbjct 258 TGATACTCATGGCTTTGCTGCTGATCCCAGTGTCGGGATGGACCTGCTTCAGCACTTTGT 317 Query 1485710 A 1485710 | Sbjct 318 A 318 Score = 125 bits (138), Expect = 1e-22 Identities = 173/241 (72%), Gaps = 1/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||| || || ||||| ||||||||| |||||| ||| ||| ||| Sbjct 6649 TGTACTTGGTGACGGCTTTTGTGCCCTCACTCACGGCGTGCTTGGCCAATTCTCCGGGCA 6590 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || ||||| || |||||||| ||||| | ||| ||| ||||||||| | Sbjct 6589 GGAGGAGACGCACAGCCGTCTGGATTTCGCGACTCGTGATGGTGGAGCGCTTGTTGTAGT 6530 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||| || | || || | |||| || || | || || || ||||| ||||| Sbjct 6529 GCGCCAAGC-GAGAGCTTCCGCAGCGATACGCTCAAAAATATCATTCACAAAGCTGTTCA 6471 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | |||| || ||| || |||||| || || ||||| ||||| |||| Sbjct 6470 TGATACTCATGGCTTTGCTGCTGATCCCAGTGTCGGGATGGACTTGCTTCAGCACTTTGT 6411 Query 1485710 A 1485710 | Sbjct 6410 A 6410 >seq42 Length=252778 Score = 123 bits (136), Expect = 4e-22 Identities = 172/241 (71%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||| || || ||||| |||||||| |||| | ||| ||| ||| Sbjct 85386 TGTACTTGGTGACGGCTTTTGTGCCCTCACTCACGGCGTGTTTGGCTAATTCTCCGGGCA 85445 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || ||||| || |||||||| ||||| | ||| ||| ||||||||| | Sbjct 85446 GGAGGAGACGCACAGCCGTCTGGATTTCGCGACTCGTGATGGTGGAGCGCTTGTTGTAGT 85505 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||| ||| || || | ||||||| || | || || || ||||| ||||| Sbjct 85506 GCGCCAAGCGAGAAGCTTCCGCAGCGATGCGCTCAAAAATATCATTCACAAAGCTGTTCA 85565 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | |||| || ||| || |||||| || || ||||| ||||| |||| Sbjct 85566 TGATACTCATGGCTTTGCTGCTGATCCCAGTGTCGGGATGGACTTGCTTCAGCACTTTGT 85625 Query 1485710 A 1485710 | Sbjct 85626 A 85626 >seq539 Length=75501 Score = 120 bits (132), Expect = 5e-21 Identities = 171/241 (71%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||| ||||| || || ||||||||| |||||| ||| ||| ||| Sbjct 1102 TGTACTTGGTGACGGCTTTGGTGCCTTCACTCACGGCGTGCTTGGCCAATTCTCCGGGCA 1161 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || ||||| || |||||||| ||||| | ||| || |||||| || | Sbjct 1162 GGAGGAGACGCACTGCTGTCTGGATTTCGCGACTCGTGATGGTTGAGCGCTTATTGTAGT 1221 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| ||| || |||| | ||||| || | || || || ||||| ||||| Sbjct 1222 GAGCCAAACGGGAAGCTTCGGCAGCAATGCGCTCAAAAATATCATTCACAAAGCTGTTCA 1281 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | |||| || ||| || |||||| || || ||||| ||||| |||| Sbjct 1282 TGATACTCATGGCTTTGCTGCTGATCCCAGTGTCGGGATGGACTTGCTTCAGCACTTTGT 1341 Query 1485710 A 1485710 | Sbjct 1342 A 1342 >seq183 Length=181677 Score = 120 bits (132), Expect = 5e-21 Identities = 171/241 (71%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||| ||||| || || ||||||||| |||||| ||| ||| ||| Sbjct 181308 TGTACTTGGTGACGGCTTTGGTGCCTTCACTCACGGCGTGCTTGGCCAATTCTCCGGGCA 181249 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || ||||| || |||||||| ||||| | ||| || |||||| || | Sbjct 181248 GGAGGAGACGCACTGCTGTCTGGATTTCGCGACTCGTGATGGTTGAGCGCTTATTGTAGT 181189 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| ||| || |||| | ||||| || | || || || ||||| ||||| Sbjct 181188 GAGCCAAACGGGAAGCTTCGGCAGCAATGCGCTCAAAAATATCATTCACAAAGCTGTTCA 181129 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | |||| || ||| || |||||| || || ||||| ||||| |||| Sbjct 181128 TGATACTCATGGCTTTGCTGCTGATCCCAGTGTCGGGATGGACTTGCTTCAGCACTTTGT 181069 Query 1485710 A 1485710 | Sbjct 181068 A 181068 >seq4942 Length=1331 Score = 111 bits (122), Expect = 2e-18 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||| ||||| || || ||||||||| |||||| ||| ||| ||| Sbjct 1103 TGTACTTGGTGACGGCTTTGGTGCCTTCACTCACGGCGTGCTTGGCCAATTCTCCGGGCA 1162 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || ||||| || |||||||| ||||| | ||| ||| |||||| || | Sbjct 1163 GGAGGAGACGCACAGCTGTCTGGATTTCGCGACTCGTGATGGTGGAGCGCTTATTGTAGT 1222 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| ||| || |||| | ||||| || | || || || ||||| ||||| Sbjct 1223 GAGCCAAACGGGAAGCTTCGGCAGCAATGCGCTCAAAAATATCATTCACAAAGCTGTTCA 1282 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTT 1485698 |||| ||| | |||| || ||| || |||||| || || ||||| Sbjct 1283 TGATACTCATGGCTTTGCTGCTGATCCCAGTGTCGGGATGGACTTGCTT 1331 >seq1063 Length=46525 Score = 111 bits (122), Expect = 2e-18 Identities = 168/239 (70%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531 ||||||||||||||||| || ||||| |||||||||| |||||| ||| || ||| | Sbjct 34379 TACTTGGTGACGGCCTTTGTGCCCTCACTGACGGCGTGCTTGGCCAATTCTCCTGGCAGG 34438 Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591 | || ||||| || |||||||| ||||| | ||| ||| ||| ||||| | Sbjct 34439 AGGAGACGCACAGCTGTCTGGATTTCGCGACTTGTGATTGTGGAGCGTTTGTTGTAATGA 34498 Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 || || || || |||| ||||||| || | || || || ||||| ||||||| Sbjct 34499 GCAAGACGAGAAGCTTCGGCAGCGATGCGCTCAAAAATATCATTAACAAAGCTGTTCATG 34558 Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710 || ||| | |||| || ||| || ||||| || || || ||||| || ||||| Sbjct 34559 ATACTCATGGCTTTGCTGCTGATCCCAGTATCGGGATGAACTTGTTTGAGAACTTTGTA 34617 >seq79 Length=216850 Score = 105 bits (116), Expect = 1e-16 Identities = 207/306 (68%), Gaps = 9/306 (3%) Strand=Plus/Plus Query 794362 TCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAG 794421 || ||||| || ||| |||||||||| |||||| ||||||||| ||||| | | Sbjct 76239 TCATTGCTGAACGTGAGTCCGGGCATGATGCCGCGTGACTTGAGCCAGAAGATTGAGGCG 76298 Query 794422 AAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAA 794481 || || || ||| || || ||||| || || |||||| | | || || ||| | ||| Sbjct 76299 AAGCTACCGCTGAAGAAAATCCCCTCAACTGCCGCAAAGGCAATGACCCTTTCGCCGAAA 76358 Query 794482 GTG---TCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACC 794538 | ||| ||| || ||||||| | ||||| || ||||| ||| |||| Sbjct 76359 TTTGCTTCCTGGC------TGGCAATCCACTGGAGTGCCCAATCGGCCTTCTTCTTCACA 76412 Query 794539 GAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAG 794598 | |||| ||| |||||||| |||||| ||||||||| ||| ||| | ||| Sbjct 76413 CACGGCAGCGTCTCGATGGCATTGAAGAGGAAGTCCTTCTCCTGCGGATCCCGTATGTAC 76472 Query 794599 GTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCA 794658 || || ||||| | ||| | || || | || || ||||| |||||||||||| Sbjct 76473 GTATCAATGAGCAAACTGTACATTTCGCTATGTACATTCTCCATGGCAATCTGGAAGCCA 76532 Query 794659 TAAAAG 794664 || ||| Sbjct 76533 TAGAAG 76538 Score = 93.3 bits (102), Expect = 7e-13 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 796297 AGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATC 796356 ||||| || ||||| | |||||||| ||||||||||||||||||||||||||||| | Sbjct 76692 AGGTCTACTTCCTCAACTGTCCAAAATGAGGCCTCGGCCTTTTTGTACATCTCCCACACA 76751 Query 796357 CGTTGGTAGCGGATGGGGAACAGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTC 796415 ||||| | |||||||| | |||||| || || ||||| || || || ||||| Sbjct 76752 TCGTGGTATTGAATGGGGAAGACAACAAATCGTCGTGGATTCTCCCGGAGTAGGGGCTC 76810 Score = 93.3 bits (102), Expect = 7e-13 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 796297 AGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATC 796356 ||||| || ||||| | |||||||| ||||||||||||||||||||||||||||| | Sbjct 78701 AGGTCTACTTCCTCAACTGTCCAAAATGAGGCCTCGGCCTTTTTGTACATCTCCCACACA 78760 Query 796357 CGTTGGTAGCGGATGGGGAACAGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTC 796415 ||||| | |||||||| | |||||| || || ||||| || || || ||||| Sbjct 78761 TCGTGGTATTGAATGGGGAAGACAACAAATCGTCGTGGATTCTCCCGGAGTAGGGGCTC 78819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915019688562548