Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq24 118 7e-22 seq1176 105 4e-18 >seq24 Length=280856 Score = 118 bits (130), Expect = 7e-22 Identities = 143/193 (74%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||||||||| || || || || || | ||| |||| || |||||||| || || ||| Sbjct 39539 TCCTTCTGAATATTGTAATCGGAGAGCGTACGCCCATCCTCGAGTTGCTTGCCAGCAAAG 39480 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| || ||||||||| | || | ||||||||||| | || ||| || || || Sbjct 39479 ATCAAACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTTGCCTTCAC--AT 39422 Query 34907 GCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964 || |||| ||| | |||||| |||| || |||||||| ||||| | ||||| | Sbjct 39421 TCTCAATCGTATCAGATGGCTCGACCTCAAGAGTGATGGTCTTACCCGTTAAAGTCTTCA 39362 Query 34965 CAAAGATCTGCAT 34977 ||||||||||||| Sbjct 39361 CAAAGATCTGCAT 39349 >seq1176 Length=25388 Score = 105 bits (116), Expect = 4e-18 Identities = 155/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAA-TGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 || || ||||| | || || | |||||||| ||||| ||||| || | | ||| |||| Sbjct 17281 AGCACAAGGTGGAGTGTTGAT-TCCTTCTGGATGTTGTAGTCGGACAATGTACGCCCATC 17339 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| ||||||||||| || || ||||| ||| |||| | || || ||||| Sbjct 17340 TTCCAGCTGCTTCCCGGCGAAGATGAGACGCTGCTGATCTGGCGGAATGCCTTCTTTGTC 17399 Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 | ||||| ||| || || || || | || | ||| || || | ||| || Sbjct 17400 CTGAATTTTAGCTTTTAC--ATTCTCGATGGTATCTGACGGCTCAACCTCGAGGGTGATC 17457 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || ||||| || || |||||||||||||| Sbjct 17458 GTCTTCCCTGTGAGTGTTTTCACAAAGATCTGCAT 17492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325647025098308