Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq2439 100 3e-16 seq1176 100 3e-16 >seq2439 Length=24097 Score = 100 bits (110), Expect = 3e-16 Identities = 150/208 (72%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 150371 ACGGTAAATTGCTGCGAATTGGCCGCCGGAAGTGTGCGAAAATAGTACATGCCGGTTTTG 150430 || |||||||| | |||||| || || ||||| ||||| ||||| || |||||| Sbjct 3987 ACAGTAAATTGGATGGCATTGGCAGCTGGTTTAGTGCGCAAATAATACATCCCCGTTTTG 3928 Query 150431 AGGCCGCGCTTCCAACCGTACATGTGCACCGACGCCATTTTAGGCAAAGTAGGGTT-TGC 150489 ||||| ||||| | | | || | || | | ||| || ||| |||| ||| Sbjct 3927 AGGCCCATTTTCCAGGCATGGAAATGAATTGAAGTGAGTTTCC-CATAGTTAGGTTCTGC 3869 Query 150490 CATGTACACGTTGAACGATTGACTTTGATCGATAAATGCTCCCCTGTCTGCTGCCATTTC 150549 || ||| | |||||| |||||||||||||| || || || || | ||| ||||||||||| Sbjct 3868 CACGTAAATGTTGAATGATTGACTTTGATCAATGAAGGCCCCACGGTCAGCTGCCATTTC 3809 Query 150550 AATCATATATTTTC-CATTGTTCTCCCA 150576 |||||| | ||||| | ||| | ||||| Sbjct 3808 AATCAT-TGTTTTCACCTTGATTTCCCA 3782 >seq1176 Length=25388 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 137214 TGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACC 137273 ||| ||||| || || |||||||| ||| || ||| | | ||||| || || || || Sbjct 17295 TGTTGATTCCTTCTGGATGTTGTAGTCGGACAATGTACGCCCATCTTCCAGCTGCTTCCC 17354 Query 137274 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTT 137333 || |||| ||||| |||||||| || || |||||||||||||| |||||| ||| Sbjct 17355 GGCGAAGATGAGACGCTGCTGATCTGGCGGAATGCCTTCTTTGTCCTGAATTTTAGCTTT 17414 Query 137334 TAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGT 137393 || | || | || |||| || || || || | || | |||||| || || | ||| Sbjct 17415 TACATTCTCGATGGTATCTGACGGCTCAACCTCGAGGGTGATCGTCTTCCCTGTGAGTGT 17474 Query 137394 TTTTACGAATATTTGCAT 137411 ||| || || || ||||| Sbjct 17475 TTTCACAAAGATCTGCAT 17492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488473576382400