Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1176 104 2e-17 seq825 100 2e-16 seq24 91.5 1e-13 >seq1176 Length=25388 Score = 104 bits (114), Expect = 2e-17 Identities = 165/232 (71%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTC--TCTTTTTGTATGTTGTAATC 33578 ||||||| | | ||| | ||| || || ||||| | || || || |||||||| || Sbjct 17264 CACCACCACGAAGACGGAGCAC--AAGGTGGAGTGTTGATTCCTTCTGGATGTTGTAGTC 17321 Query 33579 GGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTG 33638 ||| | ||| || | || |||| || || ||||| || || | ||||||||||||| | Sbjct 17322 GGACAATGTACGCCCATCTTCCAGCTGCTTCCCGGCGAAGATGAGACGCTGCTGATCTGG 17381 Query 33639 CGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATT 33697 ||| | ||||||||||| |||||| | || |||| || | ||| || | | Sbjct 17382 CGGAATGCCTTCTTTGTCCTGAATTTT-AGCTTTTACATTCTCGATGGTATCTGACGGCT 17440 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || | |||||||| || ||||| | ||||| |||||||||||||| Sbjct 17441 CAACCTCGAGGGTGATCGTCTTCCCTGTGAGTGTTTTCACAAAGATCTGCAT 17492 >seq825 Length=38805 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||||||||| || ||| ||| || || |||||||| ||||| Sbjct 11869 ACCACCACGAAGACGCAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 11928 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| | || || | || || |||||||| || | |||||||||||| | || Sbjct 11929 GAGGGTGCGCCCATCCTCTAGCTGCTTCCCGGCAAAGATGAGACGCTGCTGATCCGGAGG 11988 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || ||||| || ||||||| | | |||| || | || || | ||| | Sbjct 11989 GATTCCCTCTTTATCCTGAATTTTC-GCCTTGACATTTTCAATTGTATCCGAGGGTTCGA 12047 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | |||| ||||| || || || || | ||||| || || |||||||| Sbjct 12048 CCTCAAGGGTGATGGTCTTCCCCGTGAGAGTTTTCACGAAAATCTGCAT 12096 >seq24 Length=280856 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || || || || |||||||||||||| || || | || || | ||| || || ||||| Sbjct 39539 TCCTTCTGAATATTGTAATCGGAGAGCGTACGCCCATCCTCGAGTTGCTTGCCAGCAAAG 39480 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 |||||||||||||| ||| | || | || || ||||| || || || | |||| Sbjct 39479 ATCAAACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTT-TGCCTTCACATT 39421 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 || | || || || || || |||| ||||| || ||||| ||||| || || || Sbjct 39420 CTCAATCGTATCAGATGGCTCGACCTCAAGAGTGATGGTCTTACCCGTTAAAGTCTTCAC 39361 Query 33738 AAAGATCTGCAT 33749 |||||||||||| Sbjct 39360 AAAGATCTGCAT 39349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328657801885440