Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq2439 237 1e-57 seq1176 120 3e-22 seq825 118 1e-21 >seq2439 Length=24097 Score = 237 bits (262), Expect = 1e-57 Identities = 1190/1877 (63%), Gaps = 44/1877 (2%) Strand=Plus/Minus Query 146572 GCCGCAGGTTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCACATCGCCACGAGTGA 146631 || || ||||| ||||||||||||||||| |||||||||||||| | ||| | || Sbjct 3966 GCAGCTGGTTTAGTGCGCAAATAATACATCCCCGTTTTGAGGCCCATTTTCCAGGCATGG 3907 Query 146632 TTGTGAATCGAAGTCATGATGGCGTACGTCGGCTCCGCCACGAAAAGATTAAACGATTGG 146691 ||||| ||||| | | | || | || || |||||| ||| || || ||||| Sbjct 3906 AAATGAATTGAAGTGAGTTTCCCATAGTTAGGTTCTGCCACGTAAATGTTGAATGATTGA 3847 Query 146692 CTTTGATCTATGAAAGCGTTGCGGTCGGCCGCCATCTCAATCATGCGTTTTGTCTTCATT 146751 |||||||| ||||| || ||||| || ||||| |||||||| ||| ||| ||| Sbjct 3846 CTTTGATCAATGAAGGCCCCACGGTCAGCTGCCATTTCAATCATTGTTTTCACCTTGATT 3787 Query 146752 TCCCAAGCGGTTTTGTACAGCCCCTTAACGCTATCTGGAATACCTTCAATGTTTTGAATA 146811 ||||| ||||||| |||| | | || || ||||| | ||| || || | | Sbjct 3786 TCCCACACGGTTTTATACAACTCACGAATATCCTCAGGAATTTCCAGAATATTCTGCACA 3727 Query 146812 GAGCCCTTGTGCGCAA--AAATAGTGTTTCGTATTTCGGGCGTGTAAAGGTTTAGTTTAA 146869 ||||| |||| |||| || | || ||| ||||| | ||||| ||||| | Sbjct 3726 GAGCCATTGTTGGCAATTAATTTGTTCTTC--ATTTCATCATTCCAAAGGCGTAGTTCAG 3669 Query 146870 TGAGGTCATCAATTAAATA-CTGATTGACCACTTGAAACTCGCCCGCCAGCACACGTCTG 146928 ||| || | | | || ||| || |||||||| || || || | || ||||| | | Sbjct 3668 AGAGATCCTTTAACAGATGGCTG-TTAACCACTTGGAATTCCCCAGAAAGAACACGACGG 3610 Query 146929 AGATACACATTGCTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTG 146988 |||| |||| ||| | || || || || ||||||||||| | ||||| ||||| Sbjct 3609 GTGTACATATTGGATGTGTAGGGTTCGAAGGATTCATTATTGCCAAGAATTTGAGCCGTA 3550 Query 146989 GTTGCGGTAGGCATGTACGCCACCAACAATGAATTTCGCAGACCGTACGCACGGATGTTG 147048 | || || ||||| ||||| | || |||||||| | ||| | | | || || Sbjct 3549 GAAGCCGTTGGCATTGGAGCCACAAGCAGGGAATTTCGAACACCATGCTGAGCAATCTTT 3490 Query 147049 TCCTTCAAAGTTTGCCAGTCCCACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGG 147108 ||||||| | ||| | ||| | || ||| | |||||||| |||||||| Sbjct 3489 GCCTTCAATTCATCCCAATTCCAAAGATCCGTTGGCTTTCTATTCCACATATCGTACTGC 3430 Query 147109 AGCACTCCTCGACTGGCGGGACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCC 147168 || | ||| || | ||||| ||| | |||| || |||| || || Sbjct 3429 AGAATTCCCTTGCTTACTGGACTTCCATTGTACGTCTCATATGGTCCGAGCTTCTCAGCG 3370 Query 147169 AATTCACAGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGG 147228 | ||||| || ||||| || ||||||||||| |||||||| |||||||| ||| || Sbjct 3369 AGCTCACAACTAGCCTCAAGAGCTCCATAGTAAATGGTTTCAAAGATTTGTTGGTTGAGT 3310 Query 147229 ACGGTCGCTTCTTCGCTCTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCC 147288 | ||||||| ||| || || || | |||| || | | ||||| || | ||| Sbjct 3309 TTCTTGGCTTCTTTGCTATCATATGGGAGGCGCATGAGAATGTAAGCATCCGCTAGACCT 3250 Query 147289 TGGATACCGACGCCGATAGGTCGATGCTTTTCG----TTGCTGCGCTTCGCGCTCGCTAT 147344 || | || | || || |||| || | ||| ||| |||||| || | || Sbjct 3249 TGAACTCCAATTCCAATCGGTC--TG--TGTCGCATATTGGAGCGCTTTGCTTCGGGTAC 3194 Query 147345 GGGATAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGT 147404 ||| |||| |||| || |||| |||||||| || || |||| || || | | Sbjct 3193 GGGGTAGTAGTTGATGTCTATAACTTTGTTGAGATTGCGTGTGACAATCTTCGTGACGGA 3134 Query 147405 TTTGAGTTTCTCGAAATCATAAGTCCCGTCTTCGACACGTACGCATTGGTTCACGGCGAT 147464 || || ||||| |||||||| ||| | ||| |||| | || | || || Sbjct 3133 CTTTAGCTTCTCAAAATCATACGTC---TTATCGGGCAGTACAAACATATTAAGTGCAAT 3077 Query 147465 AGACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTG--TACTGCACGATTTCGGCG 147522 || || | |||||| || || |||| || | | | | || | ||||| |||| | Sbjct 3076 TGATGCTAAATTGCACACAGCAATCTCATC--CTTGGACGAATATTCAACGATCTCGGTG 3019 Query 147523 CACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCG 147582 || |||||||| || || || | ||| |||||||| || || || || || ||| Sbjct 3018 CAGAGGTTGCTACAGCGAATTGTACCAATATTCTGCTGATTACTCTTACGGTTACATGCG 2959 Query 147583 TCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCTA 147639 || ||| | ||||| ||||| || || || ||||| ||| || ||| ||||| | Sbjct 2958 TCCTTGTACAGCATATACGGCGTTCCCGTTTCTACTTGACTTTGAATGATGGCAAACCAA 2899 Query 147640 TGCAGGTCCTGCGCTCGCACCCGCTGCCGA---TAGCGGCCCTCGTTTTCGTACCGCTCG 147696 || || | ||| | || || ||| || | || || ||||||| | Sbjct 2898 ---AGATCTCGAGCTGGTAC---CTTACGAATGTACTGACCTTCTGCTTCGTACTTTGTG 2845 Query 147697 TACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACAC 147756 ||||| | ||| || || || ||||||| | || || |||| | || ||| Sbjct 2844 TACAATTTATTAAATTCTTCACCCCAGCAATCAAACAATCCAGGGCACTTGTTAGGGCAC 2785 Query 147757 ATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGC 147816 || || ||| | ||| || || || ||||||| | ||| || | ||| ||| Sbjct 2784 ATGAGACTCCATTCACCATCCTCGGAGACACGCTGCATAAATAAATCAGGAATCCAGAGC 2725 Query 147817 GCGTACATAAGATCGCGCGCT-TTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAG 147875 || || | ||||| || ||| ||| | || || | || ||| | | || Sbjct 2724 GCATAGAAGAGATCTCGTGCTCGTGC-CTTTTCCTTACCGGTATTCTTTTTAAGGTCTAG 2666 Query 147876 CACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGC-- 147933 | | |||| || | ||||||||||||| ||| | || | |||||| ||| Sbjct 2665 GAATTCAAAGATATCCCCATGCCAGGGTTCAAGGTATATTGCAAAGGCACCTGGGCGCTT 2606 Query 147934 -TTTCCGCCCTGGTCGACATGGC--GCACCA-TGTTGTTAAACACGCGCACCATGGGTTC 147989 || || || || || || | || ||| | |||||| | ||||| | ||| ||| | Sbjct 2605 ATTCCCACCTTGATCAACGTAGCAGGCAGTAGTGTTGT---AGACGCGAAGCATCGGTAC 2549 Query 147990 CAGGCCGCTCGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTG 148049 || || ||| ||||| ||||| | || | || || || ||||| | ||| Sbjct 2548 GAGTCCATTCGATGTGCCATTGGTTCCAGCAATGTGACTACCACGAGCTCGAATGCAGTG 2489 Query 148050 CACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGT 148109 ||||| ||||| || || | ||||||| || |||||| | || ||| Sbjct 2488 AGTATTAACACCAATCCCTCCTGCAGACTTTGAGATTAGAGCGCATTGTTTCAGTGTATC 2429 Query 148110 GTAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGG 148169 |||||| || || || ||||| | | | || | ||||| || | | || || Sbjct 2428 GTAGATACCATCAATACTGTCATCAGCCATGGACAGGAGGAAACAAGACGATAGCTGAGG 2369 Query 148170 AATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCAT 148229 | | || | || | || || || || |||||||| || | ||| | Sbjct 2368 CACTGGAGTGGCAGCTGCAAAGAGTGTTGGTGATGCGTGCGTGAAATACCGTTGTGATAG 2309 Query 148230 CATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCG 148289 | | ||||||||||| || | | ||||| | |||||||| |||| | || || Sbjct 2308 AAGGTTGTACGTCTCAATGGCTGCAGCAATGTCATTCCCGTGAATTCCCACAGATACTCG 2249 Query 148290 CATGAGCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATT 148349 ||| ||||| ||||| || | ||| || | || | |||||| | | |||| | Sbjct 2248 CATCAGCATATGCTGGGGCCTTTCAGCGATTTTCCCGCCGATCTTCATTAAATATGATCT 2189 Query 148350 TTCGAGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCGC 148409 ||||| || ||| | ||||| || |||| || | || | || | ||||||||| Sbjct 2188 CTCGAGTGTCTTGAAGCCAAAATAGCTGTACCCATAGTCCCGATCATGCACGATGGCCGA 2129 Query 148410 ATCTAGTGTCTCAGCAT 148426 || || ||||||||| Sbjct 2128 ATTAAGCTTCTCAGCAT 2112 >seq1176 Length=25388 Score = 120 bits (132), Expect = 3e-22 Identities = 144/196 (73%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 131928 TTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGG 131987 |||| || || || |||||||||||| || |||||| |||||| ||||| || |||| Sbjct 17297 TTGATTCCTTCTGGATGTTGTAGTCGGACAATGTACGCCCATCTTCCAGCTGCTTCCCGG 17356 Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCA 132047 |||| |||||||| |||||||| || ||||||||||| || |||||| ||| | Sbjct 17357 CGAAGATGAGACGCTGCTGATCTGGCGGAATGCCTTCTTTGTCCTGAATTTTAGCTTTTA 17416 Query 132048 ACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107 | || | ||||| | |||||| || |||| || | ||| || || || || |||| Sbjct 17417 CATTCTCGATGGTATCTGACGGCTCAACCTCGAGGGTGATCGTCTTCCCTGTGAGTGTTT 17476 Query 132108 TTATGAAAATCTGCAT 132123 | | || |||||||| Sbjct 17477 TCACAAAGATCTGCAT 17492 >seq825 Length=38805 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| |||||||| | | | ||||| || || |||||||||||| | ||| ||| | Sbjct 11882 CGCAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGCCCA 11941 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || || ||||| || |||| | |||| |||||||| ||||| ||||| || || |||||| Sbjct 11942 TCCTCTAGCTGCTTCCCGGCAAAGATGAGACGCTGCTGATCCGGAGGGATTCCCTCTTTA 12001 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || |||||| || | | ||| | ||||| | || || || || | || | Sbjct 12002 TCCTGAATTTTCGCCTTGACATTTTCAATTGTATCCGAGGGTTCGACCTCAAGGGTGATG 12061 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || || |||||||| | |||||||||||| Sbjct 12062 GTCTTCCCCGTGAGAGTTTTCACGAAAATCTGCAT 12096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476542496495520