Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq2439 154 1e-32 >seq2439 Length=24097 Score = 154 bits (170), Expect = 1e-32 Identities = 506/775 (65%), Gaps = 15/775 (2%) Strand=Plus/Minus Query 136638 CACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTT 136697 ||| || |||||||| | ||| || || |||||||| | || ||| ||||| ||||| || Sbjct 3988 CACAGTAAATTGGATGGCATTGGCAGCTGGTTTAGTGCGCAAATAATACATCCCCGTTTT 3929 Query 136698 TAAACCCTTCTCCCAGGAATAATTATGTATAGATGACAAAATTTTATAGCTCGGATCGGC 136757 | ||| | | ||||| || ||| || || | | | |||| | || || || Sbjct 3928 GAGGCCCATTTTCCAGGCATGGAAATGAATTGAAGTGAGTTTCCCATAGTTAGGTTCTGC 3869 Query 136758 CACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGTT 136817 |||| ||| || | ||||| || ||||| ||| | | || ||||| || ||||| || Sbjct 3868 CACGTAAATGTTGAATGATTGACTTTGATCAATGAAGGCCCCACGGTCAGCTGCCAT-TT 3810 Query 136818 CAATAGTACTTTTTGC-TTAATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGGGCG 136876 |||| | |||| | || |||||||| |||||||| | | ||| | || | Sbjct 3809 CAATCATTGTTTTCACCTTGATTTCCCACACGGTTTTATACAACTCACGAATATCCTCAG 3750 Query 136877 GAATTTCATCGATATTCTGTACAGATCCGTTGTTTTTGATGATTTT---CATCATGAGAT 136933 ||||||| |||||||| ||||| || ||||| || | ||| | |||| || Sbjct 3749 GAATTTCCAGAATATTCTGCACAGAGCCATTGTTGGCAATTAATTTGTTCTTCATTTCAT 3690 Query 136934 CAGTCGAGTATACGTTGCTCTCTATGAGTTTATCGACGAGATG-CTGATTTACTACTTGA 136992 || || | | ||| | || ||| | | | ||||| ||| || || ||||| Sbjct 3689 CATTCCAA-AGGCGTAGTTCAGA--GAGATCCTTTAACAGATGGCTG-TTAACCACTTGG 3634 Query 136993 TATTCGCCCGATAGCACTCTGCGTACGTACAGATTACTAGTGAACGGCTCGAACGATTCG 137052 |||| || || || || | || ||||| ||| ||| | || ||||| ||||| Sbjct 3633 AATTCCCCAGAAAGAACACGACGGGTGTACATATTGGATGTGTAGGGTTCGAAGGATTCA 3574 Query 137053 TTGTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATGTAAGCGATCAACAATGAATTC 137112 || || || | ||| || || || | || || ||||| ||| | | || ||||| Sbjct 3573 TTATTGCCAAGAATTTGAGCCGTAGAAGCCGTTGGCATTGGAGCCACAAGCAGGGAATTT 3514 Query 137113 CGTAAACCGTGTACGGCCAATTGTTGC-TTGAGCTCTTTCCAGTTCCACAGATTGTTCGA 137171 || | ||| || || ||| |||| || | || | ||| ||||| |||| || Sbjct 3513 CGAACACCATGCTGAGC-AATCTTTGCCTTCAATTCATCCCAATTCCAAAGATC---CGT 3458 Query 137172 TTGGGTTATATTCCACAAATCAAACTGCAAAAGTCCGCGACTTGCAGGACTTTCTGCATA 137231 | | || ||||||||| ||| |||||| || ||| ||| | |||||| | || Sbjct 3457 TGGCTTTCTATTCCACATATCGTACTGCAGAATTCCCTTGCTTACTGGACTTCCATTGTA 3398 Query 137232 AGAATCATATGTTCCGTGCAGTTTCGCCAGTTCAATACTCTGGACTAGTGCGCCATAGTA 137291 | ||||||| |||| || | || || ||| ||| | || || |||||||| Sbjct 3397 CGTCTCATATGGTCCGAGCTTCTCAGCGAGCTCACAACTAGCCTCAAGAGCTCCATAGTA 3338 Query 137292 AATAGTTTCGGAGATTTTTCTATTCAATTCTCTAGCTTCTTGGCTGTCGTAGGGCATATC 137351 ||| ||||| |||||| | || | || | ||||||| ||| || || || | Sbjct 3337 AATGGTTTCAAAGATTTGTTGGTTGAGTTTCTTGGCTTCTTTGCTATCATATGGGAGGCG 3278 Query 137352 CAATATAGCGAAAGCATCTGCAAGTCCTTGAATACCGATACCGATAGGTCTGTGT 137406 || | | | ||||||| || || ||||||| || || || || ||||||||| Sbjct 3277 CATGAGAATGTAAGCATCCGCTAGACCTTGAACTCCAATTCCAATCGGTCTGTGT 3223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445030239642240