Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq79 179 5e-39 >seq79 Length=216850 Score = 179 bits (198), Expect = 5e-39 Identities = 381/564 (68%), Gaps = 11/564 (2%) Strand=Plus/Minus Query 1455716 GAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGG 1455775 ||||| || || || || || || || ||||| | |||||||| | ||||| Sbjct 76810 GAGCCCCTACTCCGGGAGAATCCACGACGATTTGTTGTCTTCCCCATTCAATACCACGAT 76751 Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCT 1455835 | ||||| |||||| ||||||||||||||||| |||||||| | ||||| || ||||| Sbjct 76750 GTGTGGGAGATGTAC-AAAAAGGCCGAGGCCTCATTTTGGACAGTTGAGGAAGTAGACCT 76692 Query 1455836 CGGCGCCGACACGGTCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCA 1455895 | || | || |||||| | ||| || ||| | | ||||| | || Sbjct 76691 ATCCCGGGATATGGATCACTGGAATGCTTTGAAGGATTGCGAAAGGAAATTCATTAGCCA 76632 Query 1455896 CGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCT 1455955 |||||| || || ||| || || |||||| || || ||||| || | | |||| Sbjct 76631 CGTCCTGGCATTCTTT-GCGGCATCCGATGGGATTGTAAATGAGAATCTCGTGGAGCGCT 76573 Query 1455956 TTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCG 1456015 | | | ||||| ||| | |||||||||| || || || || |||||||| ||||| | Sbjct 76572 TCAGTCAGGAGGTGCAAATCACAGAGGCACGATTCTTCTATGGCTTCCAGATTGCCATGG 76513 Query 1456016 AAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCG 1456075 | || | || |||| ||| | || || || || ||| | ||| ||| | Sbjct 76512 AGAATGTACATAGCGAAATGTACAGTTTGCTCATTGATACGTACATACGGGATCCGCAGG 76453 Query 1456076 AGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACT 1456135 |||||||| |||||| |||||||| ||| |||||| |||| ||| |||||||| | Sbjct 76452 AGAAGGACTTCCTCTTCAATGCCATCGAGACGCTGCCGTGTGTGAAGAAGAAGGCCGATT 76393 Query 1456136 GGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGG 1456192 |||| | ||||||| || | |||| | | | || | ||| || || | | Sbjct 76392 GGGCACTCCAGTGGATTGCCAGCCAGGAAG-----CAAATTTCGGCGAAAGGGTCATTGC 76338 Query 1456193 CTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAA 1456251 |||||| || || ||||| || || ||| || || ||| | | ||||| |||||||| Sbjct 76337 CTTTGCGGCAGTTGAGGGGATTTTCTTCAGCGGTAGCTTCGCCTCAATCTTCTGGCTCAA 76278 Query 1456252 GAAGCGCGGCCTCATGCCCGGTCT 1456275 | |||||| |||||||||| || Sbjct 76277 GTCACGCGGCATCATGCCCGGACT 76254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7176698917404184